Information on SUBCLASS 2.1.54 |
Subclass Accession number: 4554
Subclass: 2.1.54 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.9 +/- 13.6 Average RMSD (Å) : 0.800 +/- 0.265 Consensus geometry
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Consensus Sequence: | XphDhX |
(φψ)-conformation: | aappaa |
Pattern: | [AEP] | [EQ] | x | [GIV] | x | [NQR] | [FI] | [D] | [IMV] | [AGR] | [GPY] | [FVW] | [FTY] | x |
Conservation: | -0.406 | 1.196 | -0.972 | -0.689 | -0.831 | 0.159 | 0.428 | 2.706 | 0.513 | -0.477 | -0.831 | -0.053 | 0.018 | -0.760 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mzg_A_94 | 1mzg | A | 94 | 107 | PQDIVNFDVRPWFE | HHHHHH---HHHHH | aaaaaaxxaaaaaa |
1pkx_A_117 | 1pkx | A | 118 | 131 | EEAVEQIDIGGVTL | HHHHHT--SHHHHH | aaaaaaxxaaaaaa |
2lis_A_82 | 2lis | A | 90 | 103 | AEIGRRIDMAYFYD | HHHHHHS-THHHHH | aaaaaaxxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | P - 94 |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | D - 96 |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | I - 97 |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | F - 100 |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | P - 104 |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | W - 105 |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | F - 106 |
1mzg_A_94 | 1mzg | A | MSESELENOMETHIONINE | E - 107 |
1pkx_A_117 | 1pkx | A | XMPXANTHOSINE-5'-MONOPHOSPHATE | I - 124 |
1pkx_A_117 | 1pkx | A | XMPXANTHOSINE-5'-MONOPHOSPHATE | D - 125 |
1pkx_A_117 | 1pkx | A | XMPXANTHOSINE-5'-MONOPHOSPHATE | I - 126 |
1pkx_A_117 | 1pkx | A | XMPXANTHOSINE-5'-MONOPHOSPHATE | G - 127 |
1pkx_A_117 | 1pkx | A | XMPXANTHOSINE-5'-MONOPHOSPHATE | G - 128 |
1pkx_A_117 | 1pkx | A | XMPXANTHOSINE-5'-MONOPHOSPHATE | V - 129 |
1pkx_A_117 | 1pkx | A | XMPXANTHOSINE-5'-MONOPHOSPHATE | L - 131 |
Clusters included in this Subclass |
CLUSTER: HH.3.287 |