Information on SUBCLASS 2.2.4 |
Subclass Accession number: 4565
Subclass: 2.2.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 28 Average sequence ID (%) : 14.4 +/- 17.7 Average RMSD (Å) : 0.625 +/- 0.127 Consensus geometry
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Consensus Sequence: | XXXpXX |
(φψ)-conformation: | aalpaa |
Pattern: | x | x | [acilmvy] | x | x | [degknr] | [dehknsty] | [aegnpqs] | x | [agilvw] | [ckltv] | x |
Conservation: | -1.048 | -0.691 | 1.603 | -0.688 | -0.092 | 0.808 | 1.320 | 0.918 | -1.069 | 0.652 | -0.633 | -1.079 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ak2_*_47 | 1ak2 | - | 53 | 64 | AMVASGSELGKK | HHHHHT-HHHHH | aaaaavxaaaaa |
1aky_*_35 | 1aky | - | 41 | 52 | SQIAKGTQLGLE | HHHHTT-HHHHH | aaaaavxaaaaa |
1aoa_*_216 | 1aoa | - | 217 | 228 | EDLRAGKPHLVL | HHHHTT-HHHHH | aaaaavxaaaaa |
1aoa_*_355 | 1aoa | - | 356 | 367 | ADVVSGNPKLNL | HHHHTT-HHHHH | aaaaavpaaaaa |
1e3d_B_378 | 1e3d | B | 384 | 395 | VAYGHNHKTIKP | HHHHTT-TTHHH | aaaaalpaaaaa |
1e4y_A_31 | 1e4y | A | 37 | 48 | AAVKSGSELGKQ | HHHTTT-HHHHH | aaaaavxaaaaa |
1efc_A_174 | 1efc | A | 175 | 186 | LKALEGDAEWEA | HHHHTT-HHHHH | aaaaagxaaaaa |
1esw_A_161 | 1esw | A | 161 | 172 | LPLRKREEKALR | HHHHTT-HHHHH | aaaaalxaaaaa |
1ezv_C_111 | 1ezv | C | 131 | 142 | GYCCVYGQMSHW | HHHHT-BHHHHH | aaaaalxaaaaa |
1f0j_A_283 | 1f0j | A | 285 | 296 | FLINTNSELALM | HHHHTT-HHHHH | aaaaavpaaaaa |
1g99_A_284 | 1g99 | A | 289 | 300 | EAASKGNRKAEL | HHHHTT-HHHHH | aaaaavxaaaaa |
1gc5_A_319 | 1gc5 | A | 323 | 334 | KEVLEGHIFSVI | HHHHTT-HHHHH | aaaaavxaaaaa |
1gs9_A_25 | 1gs9 | A | 38 | 49 | RWVQTLSEQVQE | HHHHH--HHHHH | aaaaalxaaaaa |
1gx5_A_105 | 1gx5 | A | 106 | 117 | KDVRNLSSKAVN | HHHHTT-HHHHH | aaaaalxaaaaa |
1klx_A_77 | 1klx | A | 86 | 97 | KACGLNDQDGCL | HHHHTT-HHHHH | aaaaavxaaaaa |
1l5j_A_128 | 1l5j | A | 134 | 145 | EKAKAGNEYAKQ | HHHHTT-HHHHH | aaaaagxaaaaa |
1mb8_A_149 | 1mb8 | A | 150 | 161 | DDIADGNPKLTL | HHHHTT-HHHHH | aaaaavpaaaaa |
1nst_A_706 | 1nst | A | 716 | 727 | HQRAHDDPVALK | HHHHTT-HHHHH | aaaaalxaaaaa |
1ouv_A_225 | 1ouv | A | 234 | 245 | KACELENGGGCF | HHHHTT-HHHHH | aaaaavxaaaaa |
1ouv_A_45 | 1ouv | A | 54 | 65 | KACDLKENSGCF | HHHHTT-HHHHH | aaaaavxaaaaa |
1ouv_A_81 | 1ouv | A | 90 | 101 | KACDLNYSNGCH | HHHHTT-HHHHH | aaaaavxaaaaa |
1p3j_A_31 | 1p3j | A | 37 | 48 | AAMKEETPLGLE | HHHHTT-HHHHH | aaaaavxaaaaa |
1s3g_A_31 | 1s3g | A | 37 | 48 | AAIQEGTELGVK | HHHHHT-HHHHH | aaaaavpaaaaa |
1so2_A_830 | 1so2 | A | 832 | 843 | FLVATNAPQAVL | HHHHTT-HHHHH | aaaaalpaaaaa |
1ubl_L_387 | 1ubl | L | 393 | 404 | IAYSQGHPKVKA | HHHHTT-HHHHH | aaaaavpaaaaa |
1zin_*_31 | 1zin | - | 37 | 48 | AAMKEGTPLGLQ | HHHHHT-HHHHH | aaaaavxaaaaa |
2ak3_A_36 | 2ak3 | A | 42 | 53 | DNMLRGTEIGVL | HHHHTT-HHHHH | aaaaalxaaaaa |
3adk_*_39 | 3adk | - | 45 | 56 | AEVSSGSARGKM | HHHHHT-HHHHH | aaaaagxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4y_A_31 | 1e4y | A | AC1AP5 BINDING SITE FOR CHAIN A | T - 31 |
1e4y_A_31 | 1e4y | A | AC1AP5 BINDING SITE FOR CHAIN A | G - 32 |
1e4y_A_31 | 1e4y | A | AC1AP5 BINDING SITE FOR CHAIN A | R - 36 |
Clusters included in this Subclass |
CLUSTER: HH.2.158 |
CLUSTER: HH.2.205 |
CLUSTER: HH.2.55 |
CLUSTER: HH.3.41 |
CLUSTER: HH.4.28 |