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Information on SUBCLASS 2.3.3
Subclass Accession number: 4581
Subclass: 2.3.3 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 9.0 +/- 13.5
Average RMSD (Å) : 0.531 +/- 0.158

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXhpXX
(φψ)-conformation: aabpaa
Pattern: xxxxx[afilmt][denpqst][dehnpst]xx[agikmv]
Conservation:-1.446-0.627-0.8330.457-1.0111.4791.6760.2430.532-0.5030.034
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e0t_A_2441e0t   A246256DLGVEIPVEEVHHHHHS-HHHHaaaaabpaaaa
1h6k_A_4441h6k   A455465KCMRLSYHQRIHHHHTS-HHHHaaaaabbaaaa
1ihg_A_2391ihg   A255265GSRAAAEDADGHHHHHS-HHHHaaaaaxxaaaa
1j2z_A_1951j2z   A197207RMRQLLESKDIHHHHHS-HHHHaaaaabxaaaa
1j7n_A_1841j7n   A185195GQDLLFTNQLKHHHHH--HHHHaaaaaxxaaaa
1li5_A_2771li5   A279289DVLKYYDAETVHHHTTS-HHHHaaaaabxaaaa
1mun_*_301mun   -3848VMLQQTQVATVHHHTSS-HHHHaaaaabxaaaa
1p9r_A_3641p9r   A369379RLRDGIEPFLIHHH----HHHHaaaaNxpaaaa
1rkt_A_1691rkt   A173183QNALYFDEEKAHHHHHS-HHHHaaaaabxaaaa
1sdo_A_861sdo   A90100RETLSLEPEEQHHHTTS-HHHHaaaaaxxaaaa
1thg_*_791thg   -7988.LAKVIPEEFR.HHHHS-HHHH.aaaaxpaaaa
1v4e_A_101v4e   A2333ILSQFFPEQIMHHHHHS-HHHHaaaaaxxaaaa
1v8a_A_1931v8a   A203213AFVAVTEPLKAHHHTTS-HHHHaaaaabpaaaa
1vj7_A_91vj7   A1525LAAKYMNETDAHHHHHS-HHHHaaaaabxaaaa
2lis_A_132lis   A3747VHGRTLSTVQKHHGGGS-HHHHaaaaabxaaaa
3lyn_A_123lyn   A3747VHGRRLTNNQKHHGGGS-HHHHaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihg_A_2391ihg   A     GOLGLYCEROL R - 251
1ihg_A_2391ihg   A     GOLGLYCEROL E - 254
1mun_*_301mun   *     IMDIMIDAZOLE E - 37
1mun_*_301mun   *     IMDIMIDAZOLE L - 40
1mun_*_301mun   *     IMDIMIDAZOLE Q - 41
1mun_*_301mun   *     IMDIMIDAZOLE V - 45
1mun_*_301mun   *     GOLGLYCEROL R - 58
1p9r_A_3641p9r   A     MSESELENOMETHIONINE V - 364
1p9r_A_3641p9r   A     MSESELENOMETHIONINE G - 365
1p9r_A_3641p9r   A     MSESELENOMETHIONINE V - 367
1p9r_A_3641p9r   A     MSESELENOMETHIONINE T - 368
1p9r_A_3641p9r   A     MSESELENOMETHIONINE R - 369
1p9r_A_3641p9r   A     MSESELENOMETHIONINE L - 370
1p9r_A_3641p9r   A     MSESELENOMETHIONINE R - 371
1p9r_A_3641p9r   A     MSESELENOMETHIONINE D - 372
1rkt_A_1691rkt   A     MSESELENOMETHIONINE D - 169
1rkt_A_1691rkt   A     UNXUNKNOWN ATOM OR ION D - 169
1rkt_A_1691rkt   A     MSESELENOMETHIONINE G - 170
1rkt_A_1691rkt   A     UNXUNKNOWN ATOM OR ION G - 170
1rkt_A_1691rkt   A     MSESELENOMETHIONINE I - 171
1rkt_A_1691rkt   A     MSESELENOMETHIONINE I - 172
1rkt_A_1691rkt   A     UNXUNKNOWN ATOM OR ION I - 172
1rkt_A_1691rkt   A     UNXUNKNOWN ATOM OR ION Q - 173
1rkt_A_1691rkt   A     UNXUNKNOWN ATOM OR ION Y - 177
1v8a_A_1931v8a   A     ZNZINC ION T - 193
1v8a_A_1931v8a   A     ZNZINC ION G - 194
1v8a_A_1931v8a   A     ZNZINC ION C - 195

Clusters included in this Subclass
CLUSTER: HH.3.71
CLUSTER: HH.4.141
CLUSTER: HH.5.189