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Information on SUBCLASS 2.3.8
Subclass Accession number: 2226
Subclass: 2.3.8 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 6.1 (>75 %)  6.1.1 (>75 %)  6.1.1.1
GO : GO:0003676 (>75 %)  GO:0003723 (>75 %)  
SCOP : 52373 (>75 %)  52374 (>75 %)  52375 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 10.4 +/- 12.1
Average RMSD (Å) : 0.614 +/- 0.204

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XhhXXX
(φψ)-conformation: aabpaa
Pattern: x[aeks][aelm][fgikl][gnpqst][dehnr][AIV][GLT][dersw][ailmv][fly][AGNPST][agptv][adek][cdeqr][cqrs]
Conservation:-0.5980.100-0.679-1.565-1.2160.0522.3550.815-0.693-0.0471.6870.086-0.6690.421-0.2120.164
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1all_A_1261all   A134149RAMKSVATSLLSGADAHHHHHHHHTTS-HHHHaaaaaaaaaabxaaaa
1g5a_A_41g5a   A520QYLKTRILDIYTPEQRHHHHHHHGGGS-HHHHaaaaaaaaaaxxaaaa
1htj_F_4431htj   F454469LAALGDILSAYAADRSHHHHHHHHHTS-HHHHaaaaaaaaaaxpaaaa
1kiy_A_1261kiy   A132147NEHFPNVLRHFGPFCSHHHHHHHHTTS-HHHHaaaaaaaaaabxaaaa
1m1n_A_61m1n   A1025ESLIQEVLEVYPEKARHHHHHHHHTTS-HHHHaaaaaaaaaaxpaaaa
1nzy_A_2071nzy   A213228AKERFHAGWMQPVEECHHHHHHHHTTS-HHHHaaaaaaaaaabxaaaa
1psw_A_2251psw   A225240HEAGNEILAALNTEQQHHHHHHHHTTS-HHHHaaaaaaaaaabxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1all_A_1261all   A     CYCPHYCOCYANOBILIN A - 128
1all_A_1261all   A     CYCPHYCOCYANOBILIN I - 129
1all_A_1261all   A     CYCPHYCOCYANOBILIN G - 132
1htj_F_4431htj   F     MSESELENOMETHIONINE A - 450
1htj_F_4431htj   F     MSESELENOMETHIONINE L - 454
1htj_F_4431htj   F     MSESELENOMETHIONINE L - 457
1htj_F_4431htj   F     MSESELENOMETHIONINE I - 460
1htj_F_4431htj   F     MSESELENOMETHIONINE L - 461
1htj_F_4431htj   F     MSESELENOMETHIONINE Y - 464
1htj_F_4431htj   F     MSESELENOMETHIONINE R - 468
1htj_F_4431htj   F     MSESELENOMETHIONINE S - 469
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL P - 126
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL W - 127
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL W - 128
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL L - 130
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL V - 131
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL N - 132
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL F - 135
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL I - 151
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL T - 154
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL L - 155
1nzy_A_2071nzy   A     CACALCIUM ION T - 207
1nzy_A_2071nzy   A     CACALCIUM ION H - 208
1nzy_A_2071nzy   A     CACALCIUM ION Q - 210
1nzy_A_2071nzy   A     CACALCIUM ION V - 236
1nzy_A_2071nzy   A     BCA4-HYDROXYBENZOYL COENZYME A V - 236

Clusters included in this Subclass
CLUSTER: HH.3.137
CLUSTER: HH.4.75
CLUSTER: HH.5.93