Information on SUBCLASS 2.4.4 |
Subclass Accession number: 8953
Subclass: 2.4.4 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 28.2 +/- 29.9 Average RMSD (Å) : 0.480 +/- 0.249 Consensus geometry
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Consensus Sequence: | pXXpGX |
(φψ)-conformation: | aapbea |
Pattern: | [i] | [aiv] | [DEKQR] | [kqst] | [AS] | [EST] | [G] | [eg] | [itv] | [FKR] | [ENQ] | [nr] | [ALM] | [agq] | [AQS] | [ALTV] | [lvw] |
Conservation: | -0.053 | -0.470 | 0.115 | -0.451 | 0.993 | 0.284 | 3.281 | -1.000 | -0.488 | -0.404 | 0.644 | -0.476 | -0.042 | -0.937 | 0.112 | -0.257 | -0.851 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dt0_A_52 | 1dt0 | A | 55 | 71 | IVKTSSGGIFNNAAQVW | HHHH--HHHHHHHHHHH | aaaaxbeaaaaaaaaaa |
1isa_A_52 | 1isa | A | 55 | 71 | IIRSSEGGVFNNAAQVW | HHHH--HHHHHHHHHHH | aaaabbeaaaaaaaaaa |
1n7o_A_471 | 1n7o | A | 485 | 501 | IADMSEGETKQRLQSLV | HHHHS-HHHHHHHHHHH | aaaaxbeaaaaaaaaaa |
1qnn_A_53 | 1qnn | A | 56 | 72 | IVQKSEGGIFNNAGQTL | HHHH--HHHHHHHHHHH | aaaaxbeaaaaaaaaaa |
2occ_F_9 | 2occ | F | 9 | 25 | DEEQATGLEREVMLAAR | HHHH--HHHHHHHHHHH | aaaapbeaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dt0_A_52 | 1dt0 | A | FEFE (III) ION | Q - 69 |
1dt0_A_52 | 1dt0 | A | FEFE (III) ION | H - 73 |
1dt0_A_52 | 1dt0 | A | FEFE (III) ION | Y - 76 |
1isa_A_52 | 1isa | A | FE2FE (II) ION | Q - 69 |
1isa_A_52 | 1isa | A | FE2FE (II) ION | H - 73 |
1isa_A_52 | 1isa | A | FE2FE (II) ION | Y - 76 |
1qnn_A_53 | 1qnn | A | FEFE (III) ION | Q - 70 |
1qnn_A_53 | 1qnn | A | FEFE (III) ION | H - 74 |
1qnn_A_53 | 1qnn | A | FEFE (III) ION | Y - 77 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1qnn_A_53 | 1qnn | A | FE1METAL BINDING SITE OF CHAIN A | H - 74 |
Clusters included in this Subclass |
CLUSTER: HH.1.85 |
CLUSTER: HH.3.94 |