Information on SUBCLASS 3.1.11 |
Subclass Accession number: 4657
Subclass: 3.1.11 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 8.7 +/- 10.9 Average RMSD (Å) : 0.717 +/- 0.232 Consensus geometry
|
Consensus Sequence: | XXphpXp |
(φψ)-conformation: | aalppaa |
Pattern: | [adek] | x | [aflv] | [aikv] | [aeq] | x | [DEGNQ] | [FIPV] | [DKRST] | x | [dekq] | [AENQT] | [lvy] |
Conservation: | -0.363 | -1.021 | -0.770 | -0.690 | 0.329 | -1.079 | 1.543 | 0.467 | 0.615 | -1.689 | 1.317 | 0.771 | 0.570 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ckm_A_304 | 1ckm | A | 311 | 323 | LLNIEENITIDEL | HHHHHH---HHHH | aaaaaalxbaaaa |
1h54_A_518 | 1h54 | A | 519 | 531 | DTAKQLDVSDEEK | HHHHHH---HHHH | aaaaaalbxaaaa |
1is2_A_603 | 1is2 | A | 605 | 617 | ALVDAFDFKDMTL | HHHHTT---HHHH | aaaaaalxxaaaa |
1kw4_A_36 | 1kw4 | A | 37 | 49 | DDFIQQEIDGQAL | HHHHHTT--HHHH | aaaaaalxbaaaa |
1nnl_A_58 | 1nnl | A | 64 | 76 | ERLALIQPSREQV | HHHHHH---HHHH | aaaaaalxxaaaa |
1oao_C_432 | 1oao | C | 432 | 444 | KDAVAKGFRFKNY | HHHHHHT--THHH | aaaaaagxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kw4_A_36 | 1kw4 | A | MSESELENOMETHIONINE | D - 38 |
1kw4_A_36 | 1kw4 | A | MSESELENOMETHIONINE | F - 39 |
1kw4_A_36 | 1kw4 | A | MSESELENOMETHIONINE | Q - 42 |
1kw4_A_36 | 1kw4 | A | MSESELENOMETHIONINE | I - 44 |
Clusters included in this Subclass |
CLUSTER: HH.3.201 |
CLUSTER: HH.4.233 |