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Information on SUBCLASS 3.1.3
Subclass Accession number: 2268
Subclass: 3.1.3 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 12.3 +/- 15.0
Average RMSD (Å) : 0.775 +/- 0.205

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: XXchXXp
(φψ)-conformation: aalbpaa
Pattern: x[dgkqr]xx[DGKS][FILMVY][apst]x[AEQT][denqr][altv]
Conservation:-0.772-0.506-0.572-0.7571.5871.2460.180-1.6921.1120.205-0.031
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ew0_A_1641ew0   A167177VRQFGYAEEEVHHHH---HHHHaaaavbxaaaa
1fxx_A_611fxx   A6474VLITGITPQEAHHHH---HHHHaaaavbxaaaa
1i27_A_4791i27   A479489TKKTGLSSEQTHHHH---HHHHaaaavxxaaaa
1j54_A_601j54   A6373FGVHGIADEFLHHHH---HHHHaaaavxxaaaa
1n00_A_2811n00   A289299QRRNSVPLTRAHHHHSS-HHHHaaaavbxaaaa
1olt_A_3851olt   A389399EQQWDLLFADYHHHTT--HHHHaaaalbbaaaa
1oyj_A_1761oyj   A180190ERCGGFSVEEVHHHHT--HHHHaaaavbbaaaa
1tx4_A_1851tx4   A185195SDQNKMTNTNLHHHH---HHHHaaaavbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ew0_A_1641ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 170
1j54_A_601j54   A     TMPTHYMIDINE-5'-PHOSPHATE E - 61
1j54_A_601j54   A     TMPTHYMIDINE-5'-PHOSPHATE A - 62
1j54_A_601j54   A     TMPTHYMIDINE-5'-PHOSPHATE V - 65
1j54_A_601j54   A     TMPTHYMIDINE-5'-PHOSPHATE H - 66
1oyj_A_1761oyj   A     GOLGLYCEROL F - 176
1oyj_A_1761oyj   A     GOLGLYCEROL Y - 177
1oyj_A_1761oyj   A     GOLGLYCEROL E - 180
1oyj_A_1761oyj   A     GOLGLYCEROL S - 186
1oyj_A_1761oyj   A     GOLGLYCEROL V - 187
1oyj_A_1761oyj   A     GOLGLYCEROL E - 188
1oyj_A_1761oyj   A     MGMAGNESIUM ION E - 189
1oyj_A_1761oyj   A     MGMAGNESIUM ION V - 190

Clusters included in this Subclass
CLUSTER: HH.4.60