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Information on SUBCLASS 3.1.5
Subclass Accession number: 2270
Subclass: 3.1.5 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 11.4 +/- 13.8
Average RMSD (Å) : 0.800 +/- 0.261

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hpGXXXX
(φψ)-conformation: aalbpaa
Pattern: xx[ailv][dnt][GK][aefkl][dps]xx[AGKL][ekqt][aklm]x[aekr]
Conservation:-0.609-0.518-0.1130.4953.260-0.913-0.204-0.237-0.548-0.1960.195-0.161-0.365-0.086
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_A_3061a9x   A312325SKATGFPIAKVAAKHHHHS--HHHHHHHaaaavbxaaaaaaa
1bpy_A_671bpy   A7689FLATGKLRKLEKIRHHHHSS-HHHHHHHaaaavbbaaaaaaa
1dv1_A_2971dv1   A301314EMITGVDLIKEQLRHHHH---HHHHHHHaaaavxxaaaaaaa
1ex2_A_1671ex2   A168181YSVMGLPISKTMRAHHHHT--HHHHHHHaaaagbxaaaaaaa
1jms_A_2191jms   A228241IIEDGESSEAKAVLHHHHSS-HHHHHHHaaaavbbaaaaaaa
1o4w_A_241o4w   A2437VYLNKADVVGQLREHHHHT--HHHHHHHaaaalbxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a9x_A_3061a9x   A     ADPADENOSINE-5'-DIPHOSPHATE R - 306
1a9x_A_3061a9x   A     MNMANGANESE (II) ION R - 306
1a9x_A_3061a9x   A     PO4PHOSPHATE ION R - 306
1a9x_A_3061a9x   A     PO4PHOSPHATE ION S - 307
1o4w_A_241o4w   A     MSESELENOMETHIONINE V - 24
1o4w_A_241o4w   A     MSESELENOMETHIONINE Y - 25
1o4w_A_241o4w   A     MSESELENOMETHIONINE L - 26
1o4w_A_241o4w   A     MSESELENOMETHIONINE N - 27

Clusters included in this Subclass
CLUSTER: HH.2.148
CLUSTER: HH.3.249
CLUSTER: HH.4.219