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PDB code:

Information on SUBCLASS 3.1.9

Subclass Accession number: 4655 Subclass: 3.1.9 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 8 Average sequence ID (%) : 28.6 +/- 27.0 Average RMSD (Å) : 0.637 +/- 0.277 Consensus geometry d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1cqx_A_71	1cqx	A	78	105	LKNIANKHASLGVKPEQYPIVGEHLLAA	HHHHHHHHHHHT--GGGHHHHHHHHHHH	aaaaaaaaaaavxbaaaaaaaaaaaaaa
1gcv_A_81	1gcv	A	81	108	ETLALTHGKKLLVDPQNFPMLSECIIVT	HHHHHHHHHTT---GGGHHHHHHHHHHH	aaaaaaaaaaalxpaaaaaaaaaaaaaa
1gcv_B_76	1gcv	B	76	103	KDLSKKHADDLHVDPGSFHLLTDCIIVE	HHHHHHHHHTT---GGGHHHHHHHHHHH	aaaaaaaaaaalxxaaaaaaaaaaaaaa
1it2_A_89	1it2	A	97	124	KDLSQKHKTVFKVDSIWFKELSSIFVST	HHHHHHHHHTS---TTHHHHHHHHHHHH	aaaaaaaaaaalxxaaaaaaaaaaaaaa
1la6_A_82	1la6	A	82	109	MELSEQHAYKLRVDPSNFKILNHCILVV	HHHHHHHHTTS---GGGHHHHHHHHHHH	aaaaaaaaaaalxxaaaaaaaaaaaaaa
1uc3_A_91	1uc3	A	99	126	RDLSGKHAKSFQVDPQYFKVLAAVIADT	HHHHHHHHHTT---TTSHHHHHHHHHHH	aaaaaaaaaaalxxaaaaaaaaaaaaaa
1vhb_A_75	1vhb	A	78	105	VKKIAVKHCQAGVAAAHYPIVGQELLGA	HHHHHHHHHHHT--GGGHHHHHHHHHHH	aaaaaaaaaaavxbaaaaaaaaaaaaaa
2lhb_*_91	2lhb	-	99	126	RNLSGKHAKSFQVDPEYFKVLAAVIADT	HHHHHHHHHTS---GGGHHHHHHHHHHH	aaaaaaaaaaalxxwaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1cqx_A_71	1cqx	A	DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL	L - 74
1cqx_A_71	1cqx	A	DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL	V - 77
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 78
1cqx_A_71	1cqx	A	DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL	L - 78
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	N - 80
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 81
1cqx_A_71	1cqx	A	DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL	I - 81
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	K - 84
1cqx_A_71	1cqx	A	FADFLAVIN-ADENINE DINUCLEOTIDE	K - 84
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 85
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 88
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 90
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	K - 91
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	Q - 94
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	Y - 95
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	P - 96
1cqx_A_71	1cqx	A	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 98
1cqx_A_71	1cqx	A	DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL	V - 98
1cqx_A_71	1cqx	A	DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL	L - 102
1cqx_A_71	1cqx	A	DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL	I - 106
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	K - 81
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 82
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 83
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	T - 86
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 86
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 87
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 88
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 91
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	S - 92
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 93
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 93
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 94
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 95
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 96
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	N - 97
1gcv_B_76	1gcv	B	HEMPROTOPORPHYRIN IX CONTAINING FE	T - 97
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 98
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 101
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	S - 102
1gcv_A_81	1gcv	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 105
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 99
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	K - 102
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 103
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 107
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 109
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	D - 110
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	W - 113
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 114
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 117
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	S - 118
1it2_A_89	1it2	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 121
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 84
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	Q - 87
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 88
1la6_A_82	1la6	A	CMOCARBON MONOXIDE	H - 88
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 92
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 94
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	N - 98
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 99
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 102
1la6_A_82	1la6	A	CMOCARBON MONOXIDE	L - 102
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	N - 103
1la6_A_82	1la6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 106
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 98
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	K - 104
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 105
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 109
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 111
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	D - 112
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	Y - 115
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 116
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 119
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	A - 120
1uc3_A_91	1uc3	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 123
1vhb_A_75	1vhb	A	HEMPROTOPORPHYRIN IX CONTAINING FE	A - 88
1vhb_A_75	1vhb	A	HEMPROTOPORPHYRIN IX CONTAINING FE	A - 91
2lhb_*_91	2lhb	*	HEMPROTOPORPHYRIN IX CONTAINING FE	N - 100
2lhb_*_91	2lhb	*	HEMPROTOPORPHYRIN IX CONTAINING FE	P - 113
2lhb_*_91	2lhb	*	HEMPROTOPORPHYRIN IX CONTAINING FE	K - 117
2lhb_*_91	2lhb	*	HEMPROTOPORPHYRIN IX CONTAINING FE	V - 118

Clusters included in this Subclass

CLUSTER: HH.7.29

CLUSTER: HH.8.28

CLUSTER: HH.9.17

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