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PDB code:

Information on SUBCLASS 3.12.1

Subclass Accession number: 2347 Subclass: 3.12.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.15 (>75 %)  1.15.1 (>75 %)  1.15.1.12 (>75 %)   GO : GO:0004784 (>75 %)  GO:0016721 (>75 %)   SCOP : 53473 (>75 %)  53474 (>75 %)  54718 (>75 %)  54719 (>75 %)  54720 (>75 %)

Number of loops: 4 Average sequence ID (%) : 15.8 +/- 15.2 Average RMSD (Å) : 0.675 +/- 0.299 Consensus geometry d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 45-90

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ehy_A_192	1ehy	A	192	210	EEELEVHVDNCMKPDNIHG	HHHHHHHHHHHTSTTHHHH	aaaaaaaaaaaaxpvaaaa
1ie9_A_379	1ie9	A	395	413	EEHSKQYRCLSFQPECSMK	HHHHHHHHHHTTSTTHHHH	aaaaaaaaaaaaxpvaaaa
1iup_A_168	1iup	A	168	186	DELARLRYEASIQPGFQES	HHHHHHHHHHHTSTTHHHH	aaaaaaaaaaaaxpvaaaa
2gsa_A_310	2gsa	A	313	331	MTAGIKTLELLRQPGTYEY	HHHHHHHHHHHTSTTHHHH	aaaaaaaaaaaaxxvaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ie9_A_379	1ie9	A	VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL	H - 397
1ie9_A_379	1ie9	A	VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL	Y - 401
1ie9_A_379	1ie9	A	VDX5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL	L - 404
1iup_A_168	1iup	A	ISBISOBUTYRIC ACID	L - 170
1iup_A_168	1iup	A	ISBISOBUTYRIC ACID	R - 174
1iup_A_168	1iup	A	ISBISOBUTYRIC ACID	S - 189
1iup_A_168	1iup	A	ISBISOBUTYRIC ACID	M - 190

Clusters included in this Subclass

CLUSTER: HH.3.250

CLUSTER: HH.4.197

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