Information on SUBCLASS 3.2.14 |
Subclass Accession number: 2288
Subclass: 3.2.14 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004553 (>75 %) GO:0016798 (>75 %) SCOP : 48207 (>75 %) 48208 (>75 %) 81850 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 17.4 +/- 21.6 Average RMSD (Å) : 0.725 +/- 0.171 Consensus geometry
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Consensus Sequence: | XpGppXp |
(φψ)-conformation: | aalppaa |
Pattern: | [GVY] | x | [ART] | x | x | [RWY] | [AEL] | [IKL] | [AE] | [ADNQ] | [G] | [KQR] | [DES] | [ATV] | x | [PRT] | x | [ALV] | x | [AKTV] | [AMV] | x | [AKS] |
Conservation: | -0.796 | -0.483 | -0.154 | -0.928 | -0.235 | 0.602 | -0.550 | -0.259 | 0.538 | -0.436 | 3.745 | 1.099 | 0.783 | 0.093 | -0.789 | -0.122 | -0.187 | 0.185 | -1.292 | -0.587 | 0.175 | -0.587 | 0.186 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g9g_A_229 | 1g9g | A | 240 | 262 | YWADQWAKEQGKSVSTSVGKATK | HHHHHHHHTTT---HHHHHHHHH | aaaaaaaaaavbbaaaaaaaaaa |
1lf6_A_600 | 1lf6 | A | 604 | 626 | GERGMYEIAAGKDATPYVKAMEK | HHHHHHHHHTT---HHHHHHHHH | aaaaaaaaaavbxaaaaaaaaaa |
1lj8_A_387 | 1lj8 | A | 387 | 409 | VPTINRLIADGRETERAALVVAA | HHHHHHHHHHT---HHHHHHHHH | aaaaaaaaaavxpaaaaaaaaaa |
1ug9_A_593 | 1ug9 | A | 596 | 618 | GERGEYALANGQDALPYLETMHS | HHHHHHHHHTT---HHHHHHHHH | aaaaaaaaaavxxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g9g_A_229 | 1g9g | A | MGMAGNESIUM ION | P - 229 |
1g9g_A_229 | 1g9g | A | MGMAGNESIUM ION | D - 230 |
1ug9_A_593 | 1ug9 | A | GOLGLYCEROL | L - 593 |
1ug9_A_593 | 1ug9 | A | GOLGLYCEROL | L - 594 |
1ug9_A_593 | 1ug9 | A | GOLGLYCEROL | S - 595 |
1ug9_A_593 | 1ug9 | A | GOLGLYCEROL | E - 597 |
1ug9_A_593 | 1ug9 | A | GOLGLYCEROL | R - 598 |
Clusters included in this Subclass |
CLUSTER: HH.4.223 |
CLUSTER: HH.5.226 |