Information on SUBCLASS 3.3.4 |
Subclass Accession number: 4683
Subclass: 3.3.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 8.5 +/- 16.8 Average RMSD (Å) : 0.888 +/- 0.203 Consensus geometry
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Consensus Sequence: | XpXXpXp |
(φψ)-conformation: | aapapaa |
Pattern: | x | [aglpt] | x | x | [adnrst] | [ALMVY] | x | [degnt] | [aiklt] | [AEPQST] | [denrt] | x | [hknrsy] | [filtv] | x | [aer] | x | [almtv] | [aglpt] |
Conservation: | -1.873 | -1.309 | -0.097 | -0.455 | -0.833 | 2.253 | 0.529 | 0.819 | -0.740 | 1.507 | 0.573 | -0.273 | -0.204 | -0.300 | -0.278 | 0.769 | 0.124 | 0.838 | -1.049 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b3u_A_521 | 1b3u | A | 522 | 540 | PTVLRMAGDPVANVRFNVA | HHHHHGGG-S-HHHHHHHH | aaaaaaaapaxaaaaaaaa |
1c3d_*_172 | 1c3d | - | 182 | 200 | FLEANYMNLQRSYTVAIAG | HHHHHGGG---HHHHHHHH | aaaaaaaaxaxaaaaaaaa |
1ee4_A_430 | 1ee4 | A | 431 | 449 | KPLCDLLEIADNRIIEVTL | HHHHHGGGSS-HHHHHHHH | aaaaaaaaxabaaaaaaaa |
1ja1_A_383 | 1ja1 | A | 385 | 403 | VLYELAQYASEPSEQEHLH | HHHHHGGGB-SHHHHHHHH | aaaaaaaaxaxaaaaaaaa |
1jdh_A_278 | 1jdh | A | 280 | 298 | QKMVALLNKTNVKFLAITT | HHHHHGGG---HHHHHHHH | aaaaaaaaxaxaaaaaaaa |
1kgn_A_84 | 1kgn | A | 84 | 102 | GAISLLPDAETMHEEAVYT | HHHHHGGG-SSHHHHHHHH | aaaaaaaaxabaaaaaaaa |
1qqf_A_1165 | 1qqf | A | 1175 | 1193 | YLEASYLNLQRPYTVAIAG | HHHHHHTT---HHHHHHHH | aaaaaaaaxaxaaaaaaaa |
1rke_A_41 | 1rke | A | 57 | 75 | VGKETVQTTEDQILKRDMP | HHHTTTTT---HHHHHHHH | aaaaaaaabaxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c3d_*_172 | 1c3d | * | GOLGLYCEROL | L - 190 |
1c3d_*_172 | 1c3d | * | GOLGLYCEROL | Q - 191 |
1c3d_*_172 | 1c3d | * | GOLGLYCEROL | R - 192 |
1c3d_*_172 | 1c3d | * | GOLGLYCEROL | S - 193 |
1c3d_*_172 | 1c3d | * | GOLGLYCEROL | V - 196 |
1ja1_A_383 | 1ja1 | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | E - 398 |
1kgn_A_84 | 1kgn | A | FEFE (III) ION | I - 104 |
1kgn_A_84 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | I - 104 |
1kgn_A_84 | 1kgn | A | FEFE (III) ION | M - 107 |
1kgn_A_84 | 1kgn | A | FEFE (III) ION | E - 108 |
1kgn_A_84 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | E - 108 |
1kgn_A_84 | 1kgn | A | FEFE (III) ION | H - 111 |
1kgn_A_84 | 1kgn | A | OF3FERRIC ION, 1 WATER COORDINATED | H - 111 |
Clusters included in this Subclass |
CLUSTER: HH.5.168 |
CLUSTER: HH.6.85 |
CLUSTER: HH.7.92 |