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Information on SUBCLASS 3.3.6
Subclass Accession number: 4685
Subclass: 3.3.6 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 10.4 +/- 12.3
Average RMSD (Å) : 0.875 +/- 0.250

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXcXp
(φψ)-conformation: aapapaa
Pattern: x[ENRT][DKT][IL][FIP]xxx[AKN]xxxxxx[NPTV][DN]x[EMQ][EGST]x[EKMR]x[IMVW]
Conservation:-0.6900.0880.2892.323-0.248-0.324-0.496-0.924-0.047-0.820-0.122-0.3010.499-0.560-0.066-0.6253.196-0.6901.153-0.236-0.6250.153-1.2090.283
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a49_A_3901a49   A390413HRKLFEELARSSSHSTDLMEAMAMHHHHHHHHHHHHTT---HHHHHHHaaaaaaaaaaaaaaxapaaaaaaa
1h6g_B_4131h6g   B427450ANKLIEVANLACSISNNEEGVKLVHHHHHHHHHHHHHT---HHHHHHHaaaaaaaaaaaaaaxaxaaaaaaa
1otv_A_401otv   A5477QTTIPLKDAAIMANCPDAQTRRKWHHHHHHHHHHHHHT---HHHHHHHaaaaaaaaaaaaaabaxaaaaaaa
1vf6_C_1221vf6   C124147VEDLFSSLKHIQHTLVDSQSQEDIHHHHHHHHHHHHTT--SHHHHHHHaaaaaaaaaaaaaaxaxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h6g_B_4131h6g   B     MSESELENOMETHIONINE V - 447
1h6g_B_4131h6g   B     MSESELENOMETHIONINE K - 448
1h6g_B_4131h6g   B     CACALCIUM ION K - 448
1h6g_B_4131h6g   B     MSESELENOMETHIONINE L - 449
1h6g_B_4131h6g   B     CACALCIUM ION L - 449
1h6g_B_4131h6g   B     MSESELENOMETHIONINE V - 450
1h6g_B_4131h6g   B     CACALCIUM ION V - 450

Clusters included in this Subclass
CLUSTER: HH.5.194