Information on SUBCLASS 3.3.6 |
Subclass Accession number: 4685
Subclass: 3.3.6 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 10.4 +/- 12.3 Average RMSD (Å) : 0.875 +/- 0.250 Consensus geometry
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Consensus Sequence: | XXXXcXp |
(φψ)-conformation: | aapapaa |
Pattern: | x | [ENRT] | [DKT] | [IL] | [FIP] | x | x | x | [AKN] | x | x | x | x | x | x | [NPTV] | [DN] | x | [EMQ] | [EGST] | x | [EKMR] | x | [IMVW] |
Conservation: | -0.690 | 0.088 | 0.289 | 2.323 | -0.248 | -0.324 | -0.496 | -0.924 | -0.047 | -0.820 | -0.122 | -0.301 | 0.499 | -0.560 | -0.066 | -0.625 | 3.196 | -0.690 | 1.153 | -0.236 | -0.625 | 0.153 | -1.209 | 0.283 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a49_A_390 | 1a49 | A | 390 | 413 | HRKLFEELARSSSHSTDLMEAMAM | HHHHHHHHHHHHTT---HHHHHHH | aaaaaaaaaaaaaaxapaaaaaaa |
1h6g_B_413 | 1h6g | B | 427 | 450 | ANKLIEVANLACSISNNEEGVKLV | HHHHHHHHHHHHHT---HHHHHHH | aaaaaaaaaaaaaaxaxaaaaaaa |
1otv_A_40 | 1otv | A | 54 | 77 | QTTIPLKDAAIMANCPDAQTRRKW | HHHHHHHHHHHHHT---HHHHHHH | aaaaaaaaaaaaaabaxaaaaaaa |
1vf6_C_122 | 1vf6 | C | 124 | 147 | VEDLFSSLKHIQHTLVDSQSQEDI | HHHHHHHHHHHHTT--SHHHHHHH | aaaaaaaaaaaaaaxaxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h6g_B_413 | 1h6g | B | MSESELENOMETHIONINE | V - 447 |
1h6g_B_413 | 1h6g | B | MSESELENOMETHIONINE | K - 448 |
1h6g_B_413 | 1h6g | B | CACALCIUM ION | K - 448 |
1h6g_B_413 | 1h6g | B | MSESELENOMETHIONINE | L - 449 |
1h6g_B_413 | 1h6g | B | CACALCIUM ION | L - 449 |
1h6g_B_413 | 1h6g | B | MSESELENOMETHIONINE | V - 450 |
1h6g_B_413 | 1h6g | B | CACALCIUM ION | V - 450 |
Clusters included in this Subclass |
CLUSTER: HH.5.194 |