Information on SUBCLASS 3.3.7 |
Subclass Accession number: 8986
Subclass: 3.3.7 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 7.8 +/- 10.7 Average RMSD (Å) : 0.475 +/- 0.050 Consensus geometry
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Consensus Sequence: | XpchXXp |
(φψ)-conformation: | aalppaa |
Pattern: | [EQTW] | x | x | x | [AGL] | x | x | x | [DGK] | [ALP] | x | x | [DEK] | [EKQ] | [ILV] |
Conservation: | -0.132 | -0.748 | -0.167 | -0.193 | -0.047 | -0.871 | -0.810 | -0.625 | 0.537 | -0.076 | -0.748 | -1.303 | 1.561 | 1.801 | 1.821 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c4k_A_549 | 1c4k | A | 561 | 575 | QLQRLIEEDAPLKQV | HHHHHHHTT-BHHHH | aaaaaaaavxxaaaa |
1d2z_A_55 | 1d2z | A | 55 | 69 | WQQLATAVKLYPDQV | HHHHHHHTT--HHHH | aaaaaaaalxxaaaa |
1pdo_*_95 | 1pdo | - | 100 | 114 | ETLMARDDDPSFDEL | HHHHHHTT---HHHH | aaaaaaaalwxaaaa |
1t7p_A_518 | 1t7p | A | 523 | 537 | TFIYGFLYGAGDEKI | HHHHHHHTT--HHHH | aaaaaaaavxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1t7p_A_518 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | R - 518 |
1t7p_A_518 | 1t7p | A | 2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE | K - 522 |
1t7p_A_518 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | K - 522 |
1t7p_A_518 | 1t7p | A | MGMAGNESIUM ION | K - 522 |
1t7p_A_518 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | T - 523 |
1t7p_A_518 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | Y - 526 |
1t7p_A_518 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | G - 527 |
1t7p_A_518 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | Y - 530 |
Clusters included in this Subclass |
CLUSTER: HH.4.98 |