Information on SUBCLASS 3.3.8 |
Subclass Accession number: 8987
Subclass: 3.3.8 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 13.2 +/- 12.5 Average RMSD (Å) : 0.925 +/- 0.287 Consensus geometry
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Consensus Sequence: | ppGXpXp |
(φψ)-conformation: | aalppaa |
Pattern: | x | x | [LMPY] | x | x | [ALV] | [AKQ] | x | [AEGS] | x | x | [DHKS] | [G] | x | [DPRS] | [AEN] | [ST] | x | x | x | x | [AIL] | x | [EHKN] | x | [FLM] | x | [AGT] | x |
Conservation: | -0.170 | 0.143 | -0.485 | -0.904 | -0.590 | 0.292 | 0.191 | -0.237 | -0.066 | 0.303 | -1.009 | -0.066 | 4.179 | -0.941 | -0.432 | -0.085 | 1.571 | -0.223 | -0.590 | -0.799 | -0.272 | 0.496 | -0.380 | 0.511 | -0.904 | 1.071 | -0.275 | 0.277 | -0.606 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1efy_A_703 | 1efy | A | 711 | 739 | SILNEVQQAVSDGGSESQILDLSNRFYTL | HHHHHHHHHHHTT--HHHHHHHHHHHHHH | aaaaaaaaaaaavxxaaaaaaaaaaaaaa |
1egd_A_292 | 1egd | A | 310 | 338 | MSYQRAAWEVDSGRRNTYYASIAKAFAGD | HHHHHHHHHHHTTS--HHHHHHHHHHHHH | aaaaaaaaaaaavbxaaaaaaaaaaaaaa |
1fo3_A_528 | 1fo3 | A | 528 | 556 | FLPGTLALGVYHGLPASHMELAQELMETC | HHHHHHHHHHHTT--HHHHHHHHHHHHHH | aaaaaaaaaaaavxpaaaaaaaaaaaaaa |
1moq_*_403 | 1moq | - | 412 | 440 | LLMLVAKLSRLKGLDASIEHDIVHGLQAL | HHHHHHHHHHHTT--HHHHHHHHHHHHHH | aaaaaaaaaaaavxpaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 292 |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 293 |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 294 |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 296 |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 297 |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 349 |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 350 |
1egd_A_292 | 1egd | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 351 |
1fo3_A_528 | 1fo3 | A | CACALCIUM ION | F - 528 |
1moq_*_403 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | Q - 408 |
Clusters included in this Subclass |
CLUSTER: HH.4.116 |