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Information on SUBCLASS 3.4.7
Subclass Accession number: 4699
Subclass: 3.4.7 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 13.8 +/- 15.1
Average RMSD (Å) : 0.617 +/- 0.204

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XXcXcXp
(φψ)-conformation: aalbpaa
Pattern: xxx[anrs][aikl]x[dg][FIKT][DNS][fptv][AEQR][aek]x
Conservation:-0.581-0.364-0.621-0.318-0.733-0.4641.574-0.3802.306-0.9741.096-0.101-0.440
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg6_*_3171bg6   -325337LISSLIDTDFRKEHHHHHTT--HHHHaaaaaalbxaaaa
1d8w_A_121d8w   A2234QRFAAVGIDVEEAHHHHHTT--HHHHaaaaaavbxaaaa
1k32_A_10371k32   A10371049PHDYLSGKDPQIDHHHHHTT--HHHHaaaaaavbbaaaa
1ko7_A_2691ko7   A280292YRLNIMGINTAEEHHHHHTT--HHHHaaaaaavxbaaaa
1s5u_A_251s5u   A3850EMLRHHHFSQQALHHHHHTT--HHHHaaaaaavbbaaaa
1uoc_A_1151uoc   A119131ELLRKSGINFEKHHHHHHTT--HHHHaaaaaavbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d8w_A_121d8w   A     MSESELENOMETHIONINE L - 13
1d8w_A_121d8w   A     MSESELENOMETHIONINE E - 14
1d8w_A_121d8w   A     MSESELENOMETHIONINE W - 17
1d8w_A_121d8w   A     MSESELENOMETHIONINE L - 35
1d8w_A_121d8w   A     MSESELENOMETHIONINE L - 38

Clusters included in this Subclass
CLUSTER: HH.5.93