Information on SUBCLASS 3.6.8 |
Subclass Accession number: 2334
Subclass: 3.6.8 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.8 +/- 8.8 Average RMSD (Å) : 0.900 +/- 0.100 Consensus geometry
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Consensus Sequence: | XphhcXX |
(φψ)-conformation: | aapabaa |
Pattern: | x | [ANS] | x | x | [NR] | [ACY] | [APW] | [DN] | x | [AE] | x | [AK] | x | x | x | x | x |
Conservation: | -0.576 | 0.352 | -0.692 | -0.692 | 1.721 | 0.120 | -0.576 | 2.667 | -0.807 | 1.008 | -0.460 | 0.697 | -0.576 | -0.807 | -0.807 | -0.344 | -0.228 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1k32_A_682 | 1k32 | A | 696 | 712 | LARDNYWNEAVAKEISE | HHHHH-S-HHHHHHHHH | aaaaapabaaaaaaaaa |
1mzg_A_7 | 1mzg | A | 12 | 28 | RNFLRCANWEEKYLYII | HHHHH-SSHHHHHHHHH | aaaaapabaaaaaaaaa |
1vc4_A_237 | 1vc4 | A | 237 | 253 | TSLMRAPDLEAALRELV | HHHHTSS-HHHHHHHHH | aaaaaxabaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | K - 7 |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | L - 10 |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | L - 11 |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | F - 14 |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | L - 15 |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | W - 20 |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | K - 23 |
1mzg_A_7 | 1mzg | A | MSESELENOMETHIONINE | I - 27 |
Clusters included in this Subclass |
CLUSTER: HH.4.265 |