Information on SUBCLASS 3.9.1 |
Subclass Accession number: 9011
Subclass: 3.9.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 8.8 +/- 11.9 Average RMSD (Å) : 0.820 +/- 0.192 Consensus geometry
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Consensus Sequence: | XXXhpXp |
(φψ)-conformation: | aapppaa |
Pattern: | [DEPQR] | [ert] | x | [klm] | [akn] | x | x | [PTV] | [ENST] | x | [KNQY] | [DEQT] | [rsw] | x | [gikl] | x |
Conservation: | 0.456 | -0.471 | -0.503 | 0.504 | -0.681 | -0.263 | -0.398 | 2.080 | 1.228 | -0.038 | 0.578 | 1.526 | -1.183 | -0.429 | -1.646 | -0.761 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cvu_A_74 | 1cvu | A | 77 | 92 | RIKLLLKPTPNTVHYI | HHHHHH---HHHHHHH | aaaaaaxxxaaaaaaa |
1dpg_A_405 | 1dpg | A | 405 | 420 | DEDKKNTPEPYERMIH | HHHHHH---HHHHHHH | aaaaaaxxxaaaaaaa |
1eem_A_210 | 1eem | A | 210 | 225 | PTVSALLTSEKDWQGF | HHHHHH---HHHHHHH | aaaaaaxxxaaaaaaa |
1jjv_A_149 | 1jjv | A | 153 | 168 | QRIMNSQVSQQERLKW | HHHHHHS--HHHHHHH | aaaaaabpxaaaaaaa |
1lox_*_574 | 1lox | - | 575 | 590 | ETVMATLPNLKQSSLQ | HHHHHHS--HHHHHHH | aaaaaappxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cvu_A_74 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | T - 85 |
1cvu_A_74 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | N - 87 |
1cvu_A_74 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | T - 88 |
1cvu_A_74 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | Y - 91 |
1cvu_A_74 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | I - 92 |
1dpg_A_405 | 1dpg | A | PO4PHOSPHATE ION | P - 414 |
1dpg_A_405 | 1dpg | A | PO4PHOSPHATE ION | Y - 415 |
1dpg_A_405 | 1dpg | A | PO4PHOSPHATE ION | M - 418 |
1eem_A_210 | 1eem | A | GSHGLUTHATHIONE | Y - 229 |
1lox_*_574 | 1lox | * | RS73-(2-OCTYLPHENYL)PROPANOIC ACID | Q - 590 |
1lox_*_574 | 1lox | * | RS73-(2-OCTYLPHENYL)PROPANOIC ACID | I - 593 |
1lox_*_574 | 1lox | * | RS73-(2-OCTYLPHENYL)PROPANOIC ACID | V - 594 |
Clusters included in this Subclass |
CLUSTER: HH.2.105 |