Information on SUBCLASS 4.1.1 |
Subclass Accession number: 2361
Subclass: 4.1.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 31 Average sequence ID (%) : 14.9 +/- 15.5 Average RMSD (Å) : 0.590 +/- 0.295 Consensus geometry
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Consensus Sequence: | XXcXhpXp |
(φψ)-conformation: | aalabpaa |
Pattern: | x | x | x | x | [afilvy] | x | x | [EGKQS] | x | [fhilmvw] | [denrstwy] | x | [adekqrs] | [dekqstwy] | [afgiklv] |
Conservation: | -0.953 | -0.976 | -0.730 | -0.232 | 0.185 | -0.082 | -0.599 | 2.937 | -0.557 | 0.226 | 0.061 | -0.795 | 1.195 | 0.320 | -0.001 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a3a_A_21 | 1a3a | A | 29 | 43 | GEQLVKGGYVEPEYV | HHHHHHTTSB-THHH | aaaaaaavabxaaaa |
1b7g_O_304 | 1b7g | O | 310 | 324 | DAIRASMKLMSAEDS | HHHHHHTT-S-HHHH | aaaaaaalabxaaaa |
1cy5_A_22 | 1cy5 | A | 26 | 40 | MDHMISDGFLTISEE | HHHHHHHTSS-HHHH | aaaaaaagabxaaaa |
1d2t_A_169 | 1d2t | A | 180 | 194 | GQSRVICGYHWQSDV | HHHHHHHTSS-HHHH | aaaaaaavabxaaaa |
1eu8_A_370 | 1eu8 | A | 380 | 394 | YVNSALAGKISPQEA | HHHHHHHTSS-HHHH | aaaaaaavabxaaaa |
1f14_A_207 | 1f14 | A | 218 | 232 | AIRLYERGDASKEDI | HHHHHHTTSS-HHHH | aaaaaaavabxaaaa |
1h16_A_280 | 1h16 | A | 287 | 301 | IERDLKAGKITEQEA | HHHHHHTTSS-HHHH | aaaaaaavabxaaaa |
1i58_A_456 | 1i58 | A | 460 | 474 | IRKAIEKGLIDESKA | HHHHHHTTSS-HHHH | aaaaaaavabbaaaa |
1ire_B_28 | 1ire | B | 37 | 51 | FPATFRAGFMGLDEF | HHHHHHTTS--HHHH | aaaaaaavabbaaaa |
1is2_A_571 | 1is2 | A | 571 | 585 | GGDFLEGSIITGAQL | HHHHHHTTSS-HHHH | aaaaaaalabxaaaa |
1kbl_A_343 | 1kbl | A | 350 | 364 | ACDLVDEGMITEEEA | HHHHHHTTSS-HHHH | aaaaaaavabxaaaa |
1kut_A_127 | 1kut | A | 127 | 141 | VDHLEILGIATKKQA | HHHHHHTTS--HHHH | aaaaaaavabbaaaa |
1l8a_A_144 | 1l8a | A | 148 | 162 | YARAFLEGRLTQEQL | HHHHHHTTSS-HHHH | aaaaaaavabxaaaa |
1lm5_A_2747 | 1lm5 | A | 2747 | 2761 | TEEAIRKGFIDGRAA | HHHHHHTTSS-HHHH | aaaaaaavabbaaaa |
1nh2_D_14 | 1nh2 | D | 23 | 37 | LDTLISDGRIEASLA | HHHHHHTTSS-HHHH | aaaaaaavabbaaaa |
1nvp_D_10 | 1nvp | D | 19 | 33 | LDELIQSQQITPQLA | HHHHHHTTSS-HHHH | aaaaaaalabxaaaa |
1ohl_A_290 | 1ohl | A | 296 | 310 | LHAAAEKGVVDLKTI | HHHHHHTTSS-HHHH | aaaaaaavabbaaaa |
1ols_A_315 | 1ols | A | 320 | 334 | RHYLLSQGWWDEEQE | HHHHHHHT---HHHH | aaaaaaavabbaaaa |
1oqv_A_63 | 1oqv | A | 70 | 84 | TSGLVSLGKISSDEA | HHHHHHTTSS-HHHH | aaaaaaavabxaaaa |
1paq_A_581 | 1paq | A | 596 | 610 | VYHFIATQTLGPKDA | HHHHHHTTSS-HHHH | aaaaaaalabxaaaa |
1pin_A_82 | 1pin | A | 92 | 106 | YIQKIKSGEEDFESL | HHHHHHHTSS-HHHH | aaaaaaavabxaaaa |
1q15_A_422 | 1q15 | A | 425 | 439 | REYADSLQLLPKDIV | HHHHHHTS-S-HHHH | aaaaaaalabxaaaa |
1qi9_A_465 | 1qi9 | A | 477 | 491 | AFGRQMLGIHYRFDG | HHHHHHTTS--HHHH | aaaaaaagabbaaaa |
1umd_A_296 | 1umd | A | 301 | 315 | RRFLEARGLWNEEWE | HHHHHTTT---HHHH | aaaaaaavabbaaaa |
1up8_A_531 | 1up8 | A | 543 | 557 | AIGRNMAGVHYFSDQ | HHHHHHHTS--HHHH | aaaaaaavabxaaaa |
1vdk_A_435 | 1vdk | A | 436 | 450 | KQAALELGYLTEEEF | HHHHHHTSSS-HHHH | aaaaaaavabxaaaa |
1vfr_A_94 | 1vfr | A | 101 | 115 | LSKAVADKRITEEQK | HHHHHHTTSS-HHHH | aaaaaaavabxaaaa |
1vns_*_479 | 1vns | - | 487 | 501 | AISRIFLGVHWRFDA | HHHHHHTTSS-HHHH | aaaaaaavabxaaaa |
2fok_A_548 | 2fok | A | 554 | 568 | GGEMIKAGTLTLEEV | HHHHHHHTS--HHHH | aaaaaaavabbaaaa |
3mbp_*_336 | 3mbp | - | 346 | 360 | AVINAASGRQTVDEA | HHHHHHHTSS-HHHH | aaaaaaavabxaaaa |
3ygs_P_27 | 3ygs | P | 27 | 41 | WDVLLSRELFRPHMI | HHHHHHTTSS-HHHH | aaaaaaalabxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1up8_A_531 | 1up8 | A | VANVANADATE BINDING SITE, ACTIVE SITE | R - 546 |
1up8_A_531 | 1up8 | A | VANVANADATE BINDING SITE, ACTIVE SITE | H - 552 |
Clusters included in this Subclass |
CLUSTER: HH.3.118 |
CLUSTER: HH.4.22 |
CLUSTER: HH.5.127 |
CLUSTER: HH.5.9 |
CLUSTER: HH.6.7 |