Information on SUBCLASS 4.1.6 |
Subclass Accession number: 2366
Subclass: 4.1.6 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>50 %) GO : GO:0030151 (>50 %) GO:0046914 (>50 %) SCOP : 51350 (>50 %) 53705 (>50 %) 53706 (>50 %) 53707 (>50 %) |
Number of loops: 6 Average sequence ID (%) : 15.8 +/- 16.7 Average RMSD (Å) : 0.800 +/- 0.316 Consensus geometry
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Consensus Sequence: | pXphXcXX |
(φψ)-conformation: | aalabpaa |
Pattern: | x | [ilv] | [FIVY] | [ehns] | [aef] | [DEGNR] | [lvw] | [hivy] | [DHN] | [kp] | [adgr] | [ef] | [ILVW] | [AEKQ] | [AENRS] | [CHRSY] |
Conservation: | -1.206 | 0.173 | 1.071 | -0.129 | -0.328 | -0.067 | -0.990 | -1.118 | 2.551 | 0.189 | -1.328 | 0.524 | 0.632 | 0.778 | -0.111 | -0.642 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aa6_*_223 | 1aa6 | - | 233 | 248 | VIIEENLYDKAFVASR | HHHHTT-S-HHHHHHH | aaaaalaxxaaaaaaa |
1eu1_A_243 | 1eu1 | A | 253 | 268 | TLYSEDLHDKDFLENC | HHHHTT-S-HHHHHHH | aaaaalaxxaaaaaaa |
1g8k_A_306 | 1g8k | A | 316 | 331 | YVVEQGWIDKPFIEAH | HHHHHT-S-HHHHHHH | aaaaavabbaaaaaaa |
1n3l_A_292 | 1n3l | A | 297 | 312 | KDFAAEVVHPGDLKNS | HHHHTT-S-HHHHHHH | aaaaavabxaaaaaaa |
1thf_D_225 | 1thf | D | 225 | 240 | SVFHFREIDVRELKEY | HHHHTT-S-HHHHHHH | aaaaalabxaaaaaaa |
2nap_A_225 | 2nap | A | 235 | 250 | VIINEELDNPRFWQRY | HHHHTT-S-HHHHHHH | aaaaalaxbaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.4.85 |