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Information on SUBCLASS 4.14.1
Subclass Accession number: 4817
Subclass: 4.14.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 27.2 +/- 29.6
Average RMSD (Å) : 0.340 +/- 0.055

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXXXhXXX
(φψ)-conformation: aapappaa
Pattern: [flv]xx[GNS][ai][AIV][ks]x[CS][fkr][AL][EHPS][el][de][DER][K][kry][ery]
Conservation:-0.887-0.898-0.6270.606-0.7160.561-0.341-0.3100.926-0.6610.581-0.322-0.2560.1500.7353.130-0.678-0.994
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4m_A_3191a4m   A325342LNINAAKSSFLPEEEKKEHHHHHHHTSS--HHHHHHaaaaaaaaxaxxaaaaaa
1eg3_A_1961eg3   A199216FKTGIISLCKAHLEDKYRHHHHHHHTSSS-HHHHHHaaaaaaaaxaxxaaaaaa
1io7_A_1841io7   A184201EVVSRVVNSNLSDIEKLGHHHHHHHTSS--HHHHHHaaaaaaaabaxxaaaaaa
1ndy_A_3191ndy   A325342LNINAAKSSFLPEDEKKEHHHHHHHT--S-HHHHHHaaaaaaaapaxwaaaaaa
1oks_A_41oks   A623VIRSIIKSSRLEEDRKRYHHHHHHHHS-S-HHHHHHaaaaaaaaxaxpaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 205
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 206
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 207
1io7_A_1841io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 208
1oks_A_41oks   A     MSESELENOMETHIONINE R - 4
1oks_A_41oks   A     MSESELENOMETHIONINE I - 7
1oks_A_41oks   A     MSESELENOMETHIONINE R - 8
1oks_A_41oks   A     MSESELENOMETHIONINE I - 11
1oks_A_41oks   A     MSESELENOMETHIONINE K - 12
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID L - 16
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID E - 17
1oks_A_41oks   A     MSESELENOMETHIONINE R - 20
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID R - 20
1oks_A_41oks   A     MSESELENOMETHIONINE K - 21
1oks_A_41oks   A     MSESELENOMETHIONINE R - 22
1oks_A_41oks   A     MSESELENOMETHIONINE Y - 23
1oks_A_41oks   A     NHE2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID Y - 23
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oks_A_41oks   A NHENHE BINDING SITE FOR CHAIN AR - 20
1oks_A_41oks   A NHENHE BINDING SITE FOR CHAIN AY - 23

Clusters included in this Subclass
CLUSTER: HH.4.125