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Information on SUBCLASS 5.1.4
Subclass Accession number: 2437
Subclass: 5.1.4 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 47615 (>75 %)  47616 (>75 %)  47617 (>75 %)  
 Number of loops: 10

Average sequence ID (%) : 14.2 +/- 14.7
Average RMSD (Å) : 0.790 +/- 0.281

Consensus geometry
d (Å): 17 delta (°): 135-180 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXcXphXpp
(φψ)-conformation: aalbpppaa
Pattern: x[deknrst]x[FLTY][DEGNS][imtv][deknps][FILPTV][DNPST][dekqrw][adeqt][aekt][aiv]
Conservation:-1.884-1.2570.2780.5551.823-0.263-0.151-0.7660.969-0.8060.6680.6430.190
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a28_A_8981a28   A898910SRALSVEFPEMMSHHHHT----HHHHaaaavbxbxaaaa
1e3o_C_271e3o   C3547GKLYGNDFSQTTIHHHHS----HHHHaaaavbxbxaaaa
1h99_A_1271h99   A141153KNKTGVSLPEDEAHHHHS----HHHHaaaavxbxxaaaa
1ig8_A_3591ig8   A366378QNEFGINTTVQERHHHH-----HHHHaaaavbxbxaaaa
1iqc_A_2511iqc   A260272RIQLNREFNKDEVHHHH-----HHHHaaaavbbxxaaaa
1j1j_A_921j1j   A107119YLETETLVTREAVHHHHSS---HHHHaaaalbxpxaaaa
1j7l_A_2361j7l   A242254FDLLGIKPDWEKIHHHHTS---HHHHaaaavbxwbaaaa
1jhf_A_61jhf   A1931ISQTGMPPTRAEIHHHHSS---HHHHaaaavbxxxaaaa
1l0i_A_361l0i   A4759EEEFDTEIPDEEAHHHHT----HHHHaaaalbxbpaaaa
1r4v_A_291r4v   A3749RTELDIDLTDETIHHHH-----HHHHaaaavbxxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a28_A_8981a28   A     STRPROGESTERONE V - 903
1a28_A_8981a28   A     STRPROGESTERONE F - 905
1a28_A_8981a28   A     STRPROGESTERONE M - 909
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 251
1iqc_A_2511iqc   A     CACALCIUM ION Q - 253
1iqc_A_2511iqc   A     MGMAGNESIUM ION Q - 253
1iqc_A_2511iqc   A     CACALCIUM ION A - 254
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 254
1iqc_A_2511iqc   A     CACALCIUM ION V - 255
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 255
1iqc_A_2511iqc   A     CACALCIUM ION T - 257
1iqc_A_2511iqc   A     CACALCIUM ION M - 258
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 258
1iqc_A_2511iqc   A     CACALCIUM ION G - 259
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 259
1iqc_A_2511iqc   A     CACALCIUM ION Q - 262
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 262
1iqc_A_2511iqc   A     CACALCIUM ION L - 263
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 263
1iqc_A_2511iqc   A     CACALCIUM ION F - 267
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 267
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 275
1iqc_A_2511iqc   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 279
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER S - 36
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER L - 37
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER D - 38
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER T - 39
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER V - 40
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER L - 42
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER V - 43
1l0i_A_361l0i   A     ZNZINC ION M - 44
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER L - 46
1l0i_A_361l0i   A     ZNZINC ION E - 47
1l0i_A_361l0i   A     ZNZINC ION E - 48
1l0i_A_361l0i   A     ZNZINC ION D - 51
1l0i_A_361l0i   A     ZNZINC ION T - 52
1l0i_A_361l0i   A     ZNZINC ION E - 53
1l0i_A_361l0i   A     ZNZINC ION I - 54
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER I - 54
1l0i_A_361l0i   A     PSRTHIOBUTYRIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER A - 59
1r4v_A_291r4v   A     MSESELENOMETHIONINE F - 29
1r4v_A_291r4v   A     CACCACODYLATE ION F - 29
1r4v_A_291r4v   A     CACCACODYLATE ION D - 30
1r4v_A_291r4v   A     MSESELENOMETHIONINE K - 31
1r4v_A_291r4v   A     CACCACODYLATE ION K - 31
1r4v_A_291r4v   A     MSESELENOMETHIONINE L - 32
1r4v_A_291r4v   A     MSESELENOMETHIONINE D - 33
1r4v_A_291r4v   A     ZNZINC ION D - 33
1r4v_A_291r4v   A     CACCACODYLATE ION D - 33
1r4v_A_291r4v   A     ZNZINC ION H - 34
1r4v_A_291r4v   A     CACCACODYLATE ION H - 34
1r4v_A_291r4v   A     MSESELENOMETHIONINE Y - 35
1r4v_A_291r4v   A     MSESELENOMETHIONINE F - 36
1r4v_A_291r4v   A     ZNZINC ION R - 37
1r4v_A_291r4v   A     CACCACODYLATE ION R - 37
1r4v_A_291r4v   A     MSESELENOMETHIONINE L - 40
1r4v_A_291r4v   A     MSESELENOMETHIONINE L - 44
1r4v_A_291r4v   A     ZNZINC ION L - 44
1r4v_A_291r4v   A     ZNZINC ION D - 46
1r4v_A_291r4v   A     MSESELENOMETHIONINE T - 48
1r4v_A_291r4v   A     MSESELENOMETHIONINE L - 51
1r4v_A_291r4v   A     MSESELENOMETHIONINE L - 52
1r4v_A_291r4v   A     MSESELENOMETHIONINE L - 53
1r4v_A_291r4v   A     MSESELENOMETHIONINE S - 55
1r4v_A_291r4v   A     MSESELENOMETHIONINE V - 56
1r4v_A_291r4v   A     MSESELENOMETHIONINE F - 60

Clusters included in this Subclass
CLUSTER: HH.5.245
CLUSTER: HH.6.14