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Information on SUBCLASS 5.2.2
Subclass Accession number: 9096
Subclass: 5.2.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 21.3 +/- 29.9
Average RMSD (Å) : 0.867 +/- 0.320

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXhphXhX
(φψ)-conformation: aabaappaa
Pattern: xxxxxxxxxxxxxxx
Conservation:-1.321-0.465-0.7910.278-0.7800.157-0.724-0.0010.9040.5202.079-0.6451.854-0.115-0.949
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cmv_A_1771cmv   A178192EWVTQRFPDLTAADRHHHHTS-TT--HHHHaaaaaaxaaxxaaaa
1dnp_A_3591dnp   A364378RYFMSQLIDGDLAANHHHHTT-TT--HHHHaaaaaaxaapbaaaa
1i1i_P_5481i1i   P562576DQSLHTNATLDAASEHHHTTT-SS--HHHHaaaaaabNaxxaaaa
1ied_A_1771ied   A178192EWVTQRFPDLTAADRHHHHTT-TT--HHHHaaaaaabaaxbaaaa
1irx_A_3711irx   A374388LAVLVQLPHLTEEDIHHHHTT-TT--HHHHaaaaaabaabxaaaa
1jq6_A_1771jq6   A178192EWVTQRFPDLTAADRHHHHTT-SS--HHHHaaaaaabaapxaaaa
1k87_A_5661k87   A566580FVNRIADTSLPLDELHHHHTT-TTS-HHHHaaaaaaxaaxpaaaa
1n3l_A_751n3l   A7690LHAYLDNMKAPWELLHHHHHTTTTS-HHHHaaaaaabaappaaaa
1qnf_*_3671qnf   -372386QFFMQHLVDGDLAANHHHHTT-TT--HHHHaaaaaaxaapbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 366
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 367
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 370
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 372
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 373
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 374
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 375
1dnp_A_3591dnp   A     MHF5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID L - 375
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 377
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 378
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 379
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 380
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 381
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 382
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 384
1dnp_A_3591dnp   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 385
1jq6_A_1771jq6   A     CASS-(DIMETHYLARSENIC)CYSTEINE Q - 198
1jq6_A_1771jq6   A     CASS-(DIMETHYLARSENIC)CYSTEINE W - 199
1k87_A_5661k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 566
1k87_A_5661k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 567
1k87_A_5661k87   A     1PEPENTAETHYLENE GLYCOL V - 567
1k87_A_5661k87   A     1PEPENTAETHYLENE GLYCOL N - 568
1k87_A_5661k87   A     1PEPENTAETHYLENE GLYCOL A - 571
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE F - 374
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE M - 375
1qnf_*_3671qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE M - 375
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE L - 378
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE D - 380
1qnf_*_3671qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE G - 381
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE D - 382
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE L - 383
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE N - 386
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE N - 387
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 388
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 389
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE W - 390
1qnf_*_3671qnf   *     FADFLAVIN-ADENINE DINUCLEOTIDE W - 392

Clusters included in this Subclass
CLUSTER: HH.6.29
CLUSTER: HH.7.6