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Information on SUBCLASS 5.6.3
Subclass Accession number: 4891
Subclass: 5.6.3 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005509 (>50 %)  
SCOP : 47472 (>50 %)  47473 (>50 %)  47502 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 34.9 +/- 25.8
Average RMSD (Å) : 0.600 +/- 0.200

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hXGhXXpXp
(φψ)-conformation: aalababaa
Pattern: [L][DG][AE][AW][KY][AL][AY][GT][KL][AI][ASV][G][FI]x[PQ][NS]x[DE][DE][CL][EQ]
Conservation:1.1700.060-0.4780.236-0.418-0.723-0.366-0.165-0.857-0.584-1.0552.711-0.052-1.6540.0250.326-1.4830.9501.0500.5030.804
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu6_O_4381bu6   O441461LGAAYLAGLAVGFWQNLDELQHHHHHHHHHHTTSS--HHHHHaaaaaaaaaaavababaaaaa
1ej3_A_1261ej3   A126146LDEWKAYTKAAGIIQSSEDCEHHHHHHHHHHHTS---HHHHHaaaaaaaaaaavababaaaaa
1qv0_A_1321qv0   A132152LDEWKAYGKISGISPSQEDCEHHHHHHHHHHHSS---HHHHHaaaaaaaaaaavabaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ej3_A_1261ej3   A     CZHC2-HYDROPEROXY-COELENTERAZINE W - 129
1ej3_A_1261ej3   A     CZHC2-HYDROPEROXY-COELENTERAZINE Y - 132
1ej3_A_1261ej3   A     CZHC2-HYDROPEROXY-COELENTERAZINE T - 133
1ej3_A_1261ej3   A     CZHC2-HYDROPEROXY-COELENTERAZINE A - 136
1ej3_A_1261ej3   A     CZHC2-HYDROPEROXY-COELENTERAZINE I - 138
1qv0_A_1321qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE W - 135
1qv0_A_1321qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE Y - 138
1qv0_A_1321qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE S - 142
1qv0_A_1321qv0   A     GOLGLYCEROL G - 143
1qv0_A_1321qv0   A     CZHC2-HYDROPEROXY-COELENTERAZINE I - 144
1qv0_A_1321qv0   A     GOLGLYCEROL I - 144
1qv0_A_1321qv0   A     GOLGLYCEROL S - 145
1qv0_A_1321qv0   A     GOLGLYCEROL P - 146

Clusters included in this Subclass
CLUSTER: HH.5.269