Information on SUBCLASS 6.15.1 |
Subclass Accession number: 4956
Subclass: 6.15.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 14.1 +/- 15.8 Average RMSD (Å) : 1.144 +/- 0.403 Consensus geometry
|
Consensus Sequence: | pXhXXcXphX |
(φψ)-conformation: | aapbaappaa |
Pattern: | x | [ILP] | x | [ehkmq] | x | [FLTWY] | [knprt] | [dekps] | [DENT] | x | [aeknst] | [FILPTV] | x | [ADEGQ] | [AGKL] | [ikl] | [dehkry] | x | [AGILY] | x | x | x | [aiklv] | x | [ADEKN] | [ailtv] |
Conservation: | -0.861 | 2.179 | -0.686 | 0.808 | -1.365 | 0.916 | -0.030 | -0.289 | 2.840 | -0.518 | 0.299 | -0.683 | -0.621 | 0.767 | 0.420 | 0.706 | -1.246 | -0.575 | -0.688 | -0.794 | 0.141 | -0.247 | -0.545 | -1.020 | 0.713 | 0.378 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aj8_A_79 | 1aj8 | A | 83 | 108 | EIMEALPKNTHPMGALRTIISYLGNI | HHHHHS-TT--HHHHHHHHHHHHHHH | aaaaaxpaapxaaaaaaaaaaaaaaa |
1bqb_A_247 | 1bqb | A | 257 | 282 | ALTEYLTSNSNFKDLKDALYQAAKDL | HHHHT--TT--HHHHHHHHHHHHHHH | aaaaaxbaaxbaaaaaaaaaaaaaaa |
1g0u_A_169 | 1g0u | A | 175 | 200 | FLEKRWNDELELEDAIHIALLTLKES | HHHHH--TT--HHHHHHHHHHHHHHH | aaaaaxbaaxxaaaaaaaaaaaaaaa |
1g0u_B_169 | 1g0u | B | 175 | 200 | LLQMDYKDDMKVDDAIELALKTLSKT | HHHHH--TT--HHHHHHHHHHHHHHH | aaaaaxbaapbaaaaaaaaaaaaaaa |
1g0u_J_130 | 1g0u | J | 137 | 162 | LLDHHYRPDMTTEEGLDLLKLCVQEL | HHHHH--TT--HHHHHHHHHHHHHHH | aaaaaxbaaxxaaaaaaaaaaaaaaa |
1g0u_K_131 | 1g0u | K | 137 | 162 | VLDSNYKWDLSVEDALYLGKRSILAA | HHHHH--TT--HHHHHHHHHHHHHHH | aaaaaxbaaxxaaaaaaaaaaaaaaa |
1k4t_A_588 | 1k4t | A | 601 | 626 | QLKELTAPDENIPAKILSYNRANRAV | HHHHH--TT--HHHHHHHHHHHHHHH | aaaaaxxaaxxaaaaaaaaaaaaaaa |
1kjo_A_260 | 1kjo | A | 270 | 295 | ALTQYLTPTSNFSQLRAAAVQSATDL | HHHHT--TT--HHHHHHHHHHHHHHH | aaaaaxbaapbaaaaaaaaaaaaaaa |
1pb6_A_78 | 1pb6 | A | 78 | 103 | APLKAFREDFAPLAAIKEYIRLKLEV | HHHHH--TTS-HHHHHHHHHHHHHHH | aaaaapbaaxxaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g0u_K_131 | 1g0u | K | MGMAGNESIUM ION | A - 162 |
1g0u_K_131 | 1g0u | K | MGMAGNESIUM ION | A - 163 |
1g0u_K_131 | 1g0u | K | MGMAGNESIUM ION | H - 164 |
1g0u_K_131 | 1g0u | K | MGMAGNESIUM ION | R - 165 |
1k4t_A_588 | 1k4t | A | HGMERCURY (II) ION | F - 589 |
1k4t_A_588 | 1k4t | A | PTRO-PHOSPHOTYROSINE | R - 590 |
1k4t_A_588 | 1k4t | A | HGMERCURY (II) ION | R - 590 |
1k4t_A_588 | 1k4t | A | PTRO-PHOSPHOTYROSINE | T - 591 |
1k4t_A_588 | 1k4t | A | HGMERCURY (II) ION | T - 591 |
1k4t_A_588 | 1k4t | A | PTRO-PHOSPHOTYROSINE | Y - 592 |
1k4t_A_588 | 1k4t | A | HGMERCURY (II) ION | N - 593 |
1k4t_A_588 | 1k4t | A | PTRO-PHOSPHOTYROSINE | A - 594 |
1k4t_A_588 | 1k4t | A | HGMERCURY (II) ION | A - 594 |
1k4t_A_588 | 1k4t | A | PTRO-PHOSPHOTYROSINE | S - 595 |
1k4t_A_588 | 1k4t | A | PTRO-PHOSPHOTYROSINE | V - 626 |
1k4t_A_588 | 1k4t | A | HGMERCURY (II) ION | V - 626 |
1k4t_A_588 | 1k4t | A | HGMERCURY (II) ION | L - 629 |
Clusters included in this Subclass |
CLUSTER: HH.5.83 |
CLUSTER: HH.6.131 |
CLUSTER: HH.6.248 |