Information on SUBCLASS 8.13.1 |
Subclass Accession number: 2534
Subclass: 8.13.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.21 GO : GO:0004553 (>75 %) GO:0005216 (>75 %) GO:0005244 (>75 %) GO:0005261 (>75 %) GO:0005267 (>75 %) GO:0008324 (>75 %) GO:0015075 (>75 %) GO:0015267 (>75 %) GO:0015268 (>75 %) GO:0015926 (>50 %) GO:0016798 (>75 %) SCOP : 51445 (>75 %) 51521 (>75 %) 53849 (>50 %) 53850 (>50 %) 53851 (>50 %) 54694 (>75 %) 54695 (>75 %) 54701 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 15.3 +/- 19.2 Average RMSD (Å) : 1.300 +/- 0.520 Consensus geometry
|
Consensus Sequence: | XXGXphppXpXX |
(φψ)-conformation: | aalbpaapapaa |
Pattern: | [ALP] | [ERY] | x | x | [AF] | x | [MT] | x | [LT] | x | x | x | [G] | x | [DST] | [GPV] | [NT] | [DST] | [GT] | [DEK] | [ANP] | x | [DET] | x |
Conservation: | -0.754 | -0.388 | 0.102 | -0.110 | 0.428 | -0.571 | 0.696 | -0.571 | 0.274 | -0.754 | -0.663 | -0.110 | 3.729 | -0.846 | 0.161 | -0.937 | 1.310 | 0.161 | 0.329 | 0.618 | -0.571 | -1.120 | 0.252 | -0.663 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a99_A_183 | 1a99 | A | 183 | 206 | PEEVFATVLNYLGKDPNSTKADDY | HHHHHHHHHHHTTS-TT---HHHH | aaaaaaaaaaaavxxaapaxaaaa |
1dp4_A_316 | 1dp4 | A | 327 | 350 | LYVQAVTETLAQGGTVTDGENITQ | HHHHHHHHHHHTT--TT-HHHHHH | aaaaaaaaaaaavbbaaxaaaaaa |
1pot_*_169 | 1pot | - | 169 | 192 | AREVFQMALRKLGYSGNTTDPKEI | HHHHHHHHHHHTT--TT---HHHH | aaaaaaaaaaaavbxaapaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a99_A_183 | 1a99 | A | PUT1,4-DIAMINOBUTANE | E - 185 |
1pot_*_169 | 1pot | * | SPDSPERMIDINE | R - 170 |
1pot_*_169 | 1pot | * | SPDSPERMIDINE | E - 171 |
Clusters included in this Subclass |
CLUSTER: HH.8.24 |