Information on SUBCLASS 1.2.8 |
Subclass Accession number: 1006
Subclass: 1.2.8 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 52921 (>50 %) 52922 (>50 %) 54861 (>75 %) 54913 (>75 %) 75434 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 17.3 +/- 20.7 Average RMSD (Å) : 0.714 +/- 0.107 Consensus geometry
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Consensus Sequence: | hXcXX |
(φψ)-conformation: | bbeaa |
Pattern: | x | x | [nqst] | [ILV] | [agnrs] | [ADG] | [AEPT] | x | [alm] | [aefm] | [aest] |
Conservation: | -0.867 | -0.766 | -0.128 | 2.008 | -0.682 | 1.703 | 0.357 | -0.377 | -0.099 | -0.965 | -0.184 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ff9_A_194 | 1ff9 | A | 195 | 205 | VTNVAGPELMA | EEEE-THHHHH | pbbbbeaaaaa |
1ga6_A_279 | 1ga6 | A | 280 | 290 | LQQIGGTSLAS | EEEE-SHHHHH | xbxbbeaaaaa |
1gci_*_213 | 1gci | - | 214 | 224 | YASLNGTSMAT | EEEE-SHHHHH | bbbbbeaaaaa |
1ic6_A_216 | 1ic6 | A | 217 | 227 | TRSISGTSMAT | EEEE-SHHHHH | bbbbbeaaaaa |
1jj2_D_71 | 1jj2 | D | 72 | 82 | KVTLRDEMAEE | EEEE-THHHHH | bbxbbeaaaaa |
1v6s_A_211 | 1v6s | A | 211 | 221 | RLLIGGAMAFT | EEEE-STTHHH | bbbbbeaaaaa |
1v8c_A_2 | 1v8c | A | 2 | 12 | KVNLYATFRDL | EEEE-THHHHH | xbxbbeaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ga6_A_279 | 1ga6 | A | GOLGLYCEROL | L - 280 |
1ga6_A_279 | 1ga6 | A | ACTACETATE ION | T - 286 |
1ga6_A_279 | 1ga6 | A | ACTACETATE ION | S - 287 |
1gci_*_213 | 1gci | * | CACALCIUM ION | Y - 214 |
Clusters included in this Subclass |
CLUSTER: EH.3.74 |