Information on SUBCLASS 1.3.6 |
Subclass Accession number: 101
Subclass: 1.3.6 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003677 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 12.2 +/- 17.4 Average RMSD (Å) : 0.660 +/- 0.089 Consensus geometry
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Consensus Sequence: | pXchX |
(φψ)-conformation: | aagbb |
Pattern: | [kqr] | x | [ACL] | [AEKS] | [DQTY] | x | [DGN] | x | x |
Conservation: | 0.525 | -1.095 | 0.718 | 0.598 | -0.352 | -0.920 | 1.880 | -0.336 | -1.018 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gpe_A_298 | 1gpe | A | 300 | 308 | LILEYSGIG | HHHHHTTEE | aaaaaavbe |
1iq0_A_120 | 1iq0 | A | 134 | 142 | RILAYAGRE | HHHHHTTEE | aaaaaagxx |
1nh8_A_160 | 1nh8 | A | 160 | 168 | RTLSQHDLV | HHHHHTTEE | aaaaaalbb |
1pt6_A_260 | 1pt6 | A | 267 | 275 | QDCEDENIQ | HHHHHTTEE | aaaaaalbx |
1tfr_*_40 | 1tfr | - | 56 | 64 | KKAKTLGYT | HHHHHTTEE | aaaaaagxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gpe_A_298 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 301 |
1nh8_A_160 | 1nh8 | A | AMPADENOSINE MONOPHOSPHATE | R - 160 |
1nh8_A_160 | 1nh8 | A | AMPADENOSINE MONOPHOSPHATE | T - 161 |
1nh8_A_160 | 1nh8 | A | AMPADENOSINE MONOPHOSPHATE | L - 162 |
1pt6_A_260 | 1pt6 | A | GOLGLYCEROL | A - 280 |
Clusters included in this Subclass |
CLUSTER: HE.2.49 |