Logo
Information on SUBCLASS 1.4.1
Subclass Accession number: 1030
Subclass: 1.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 11.3 +/- 15.6
Average RMSD (Å) : 0.369 +/- 0.130

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: XXXXX
(φψ)-conformation: bblaa
Pattern: xxx[egknqr]x[dersw]xx[aeklm]
Conservation:-1.3290.772-0.7561.448-1.4060.413-0.2530.2880.822
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_2481aa6   -248256RTEGFEEYRHEE-HHHHHabbgaaaaa
1ay7_B_491ay7   B5260EWRQFEQSKEEETHHHHHxbxlaaaaa
1azs_C_2871azs   C290298FLNKQDLLAEEE-HHHHHxxxvaaaaa
1cip_A_2631cip   A267275FLNKKDLFEEEE-HHHHHxxxvaaaaa
1ekf_A_881ekf   A8997RLFRPWLNMEEESHHHHHbxxlaaaaa
1eu1_A_2681eu1   A268276CTTGFDLFAHEE-HHHHHabbvaaaaa
1gw0_A_5141gw0   A517525FLERPADLREEESHHHHHxxxlaaaaa
1h16_A_5191h16   A525533GIAGLSVAAEEE-HHHHHbbbvaaaaa
1i2k_A_351i2k   A3543KVSLLSAHIEETTHHHHHbxxvaaaaa
1iuq_A_1131iuq   A113121FVGNLSLFKEEE-HHHHHbbxlaaaaa
1iye_A_491iye   A4957VVFRHREHMEEETHHHHHbxxlaaaaa
1jgt_A_4211jgt   A421428.RDKWVLRA.EETHHHHH.bxlaaaaa
1mdc_*_71mdc   -1119KQENFDGFLEEESHHHHHbbbUaaaaa
1n3l_A_201n3l   A2028EVLGEEKLKEEE-HHHHHbbbvaaaaa
1q15_A_4191q15   A419426.EVKNILRE.EESHHHHH.bbvaaaaa
1qde_A_1651qde   A167175ILDEADEMLEEETHHHHHbbxlaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1azs_C_2871azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE N - 292
1azs_C_2871azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE K - 293
1azs_C_2871azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE Q - 294
1azs_C_2871azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE D - 295
1azs_C_2871azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE L - 296
1cip_A_2631cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER N - 269
1cip_A_2631cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER K - 270
1cip_A_2631cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER K - 271
1cip_A_2631cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER D - 272
1cip_A_2631cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER L - 273
1ekf_A_881ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 96
1ekf_A_881ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 99
1i2k_A_351i2k   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 42
1i2k_A_351i2k   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 45
1iye_A_491iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID H - 56
1iye_A_491iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID R - 59
1jgt_A_4211jgt   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER D - 422
1jgt_A_4211jgt   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER K - 423
1jgt_A_4211jgt   A     MGMAGNESIUM ION K - 423
1jgt_A_4211jgt   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER R - 427
1mdc_*_71mdc   *     PLMPALMITIC ACID F - 15
1mdc_*_71mdc   *     PLMPALMITIC ACID F - 18
1mdc_*_71mdc   *     PLMPALMITIC ACID L - 19
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_5141gw0   A DC2SO4 BINDING SITE FOR CHAIN AR - 520

Clusters included in this Subclass
CLUSTER: EH.2.34