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Information on SUBCLASS 2.1.6
Subclass Accession number: 1046
Subclass: 2.1.6 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 31

Average sequence ID (%) : 10.8 +/- 13.8
Average RMSD (Å) : 0.558 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: [cfiltvwy]xxx[DEKNRST]x[adekrs]xx
Conservation:-0.250-0.757-0.8050.0662.366-0.8200.4730.162-0.435
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg6_*_1831bg6   -184192VAVENVLHTEE-S-HHHHbxbabaaaa
1bu8_A_2831bu8   A283291YPCSSYEKFEE-S-HHHHbpbabaaaa
1cb6_A_10341cb6   A10371045IKRDSPIQCEE-SSHHHHbbbabaaaa
1dbh_A_5241dbh   A526534FSAKSAEEKEE-SSHHHHbbbabaaaa
1enf_A_521enf   A5563VKFATADLAEE-SSHHHHbbbabaaaa
1f14_A_401f14   A4351LVDQTEDILEE-S-HHHHxbbabaaaa
1hbn_B_2911hbn   B294302YGTDDLAMWEE-S-HHHHxbbabaaaa
1hwl_A_5931hwl   A594602VRLPRACDSEE-SSHHHHbbbabaaaa
1i4g_A_661i4g   A6977VDFDSKDIVEE-S-HHHHbxbabaaaa
1im5_A_1471im5   A155163VKGIKPEDEEE-S-HHHHbbbabaaaa
1j2r_A_1591j2r   A167175CSAASAEQHEEBSSHHHHbbbabaaaa
1jc4_A_941jc4   A94102WRVDDIDAVEE-S-HHHHbxbabaaaa
1k8k_D_1611k8k   D167175TVFKDDDDVEE-SSHHHHbbbaxaaaa
1khb_A_921khb   A94102IVTQEQRDTEE-SSHHHHbbbabaaaa
1kll_A_741kll   A7785FEFPDTASVEE-SSHHHHbxbabaaaa
1kw3_B_1451kw3   B148156RCVPDTAKAEE-S-HHHHxxbabaaaa
1kw3_B_581kw3   B6472LEVDDAAALEE-SSHHHHbxbabaaaa
1nf9_A_1691nf9   A177185IADFSEAHHEE-SSHHHHbbbabaaaa
1nnf_A_1681nnf   A170178KLYAKNSVAEE-SSHHHHbxbabaaaa
1o5z_A_3871o5z   A387395EVIEDPLEAEE-SSHHHHbbbaxaaaa
1qis_A_2671qis   A272280LVAADSETVEE-SSHHHHbbbabaaaa
1r8h_A_3291r8h   A333341VTYHSEEQREE-SSHHHHbbbabaaaa
1reg_X_21reg   X412ITLKKPEDFEE-SSTTHHbbbabaaaa
1s7j_A_1461s7j   A148156FVLKDEETVEE-S-HHHHbbbabaaaa
1tgo_A_1811tgo   A182190DVVSTEKEMEE-SSHHHHbxbabaaaa
1uc2_A_2041uc2   A211219DKIFDPEVAEEES-HHHHabbabaaaa
1usm_A_121usm   A1624FAFPNFREAEE-SSHHHHbxbabaaaa
1usu_A_4701usu   A474482ITGESLKSVEE-SSHHHHbbbabaaaa
2dap_*_2582dap   -265273LKLDRNPDFEEESBHHHHbbbabaaaa
2nac_A_2362nac   A236244TWHATREDMEE-SSHHHHbxbabaaaa
2uag_A_3842uag   A385393EQTETMEQAEE-SSHHHHbbbabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbh_A_5241dbh   A     MSESELENOMETHIONINE F - 526
1dbh_A_5241dbh   A     MSESELENOMETHIONINE E - 533
1dbh_A_5241dbh   A     MSESELENOMETHIONINE K - 534
1dbh_A_5241dbh   A     MSESELENOMETHIONINE N - 535
1dbh_A_5241dbh   A     MSESELENOMETHIONINE N - 536
1jc4_A_941jc4   A     MSESELENOMETHIONINE W - 94
1jc4_A_941jc4   A     MSESELENOMETHIONINE R - 95
1jc4_A_941jc4   A     MSESELENOMETHIONINE L - 106
1kll_A_741kll   A     MSESELENOMETHIONINE I - 75
1kll_A_741kll   A     MSESELENOMETHIONINE F - 77
1kll_A_741kll   A     MSESELENOMETHIONINE F - 79
1kll_A_741kll   A     MSESELENOMETHIONINE K - 88
1kll_A_741kll   A     MSESELENOMETHIONINE L - 92
1kw3_B_1451kw3   B     FE2FE (II) ION H - 145
1kw3_B_1451kw3   B     FE2FE (II) ION V - 147
1nf9_A_1691nf9   A     BOGB-OCTYLGLUCOSIDE F - 180
1nf9_A_1691nf9   A     BOGB-OCTYLGLUCOSIDE A - 183
1nf9_A_1691nf9   A     BOGB-OCTYLGLUCOSIDE H - 184
1nf9_A_1691nf9   A     BOGB-OCTYLGLUCOSIDE M - 187
1nf9_A_1691nf9   A     BOGB-OCTYLGLUCOSIDE A - 188
1nf9_A_1691nf9   A     BOGB-OCTYLGLUCOSIDE L - 189
1nf9_A_1691nf9   A     BOGB-OCTYLGLUCOSIDE Y - 191
1nnf_A_1681nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID K - 174
1nnf_A_1681nnf   A     FEFE (III) ION N - 175
1nnf_A_1681nnf   A     EDT{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID N - 175
1qis_A_2671qis   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 267
1qis_A_2671qis   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 268
1r8h_A_3291r8h   A     PO4PHOSPHATE ION V - 347
2dap_*_2582dap   *     API2,6-DIAMINOPIMELIC ACID N - 270
2dap_*_2582dap   *     API2,6-DIAMINOPIMELIC ACID T - 274

Clusters included in this Subclass
CLUSTER: EH.2.28
CLUSTER: EH.3.18
CLUSTER: EH.4.47