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Information on SUBCLASS 2.1.13
Subclass Accession number: 1053
Subclass: 2.1.13 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 9.4 +/- 13.0
Average RMSD (Å) : 0.760 +/- 0.145

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: xxx[CDNRST]x[adenpq][agilvy]x
Conservation:-0.029-0.847-0.7261.902-0.9610.5860.696-0.620
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_A_10391a9x   A10401047YDTTLNGGEESSHHHHbbabaaaa
1b24_A_341b24   A4148TQKSENLIEES-HHHHbbaxaaaa
1ci9_A_3291ci9   A330337VLDDPAAAEES-HHHHbxabaaaa
1d2n_A_6471d2n   A653660TTSRKDVLEES-HHHHbbabaaaa
1e4f_T_491e4f   T4956EIKDAIAFEES-HHHHbxabaaaa
1gqe_A_3411gqe   A341348ETRNTQAVEES-HHHHbbaxaaaa
1gvf_A_781gvf   A8390HHESLDDIEE--HHHHlxabaaaa
1jf8_A_771jf8   A7986VTLCSDADEE-SHHHHbxabaaaa
1jfl_A_1891jfl   A191198IAGCTEVSEE-SHHHHxxabaaaa
1lrz_A_3971lrz   A399406KPINKPVYEESSHHHHbxabaaaa
1mgp_A_1831mgp   A188195YVSNFDYLEES-THHHbbabaaaa
1mjf_A_991mjf   A103110VEIDEDVIEES-HHHHbbabaaaa
1mw5_A_1231mw5   A127134LPESFAAREESSHHHHbxaxaaaa
1naq_A_111naq   A1724TAPDEATAEESSHHHHbbabaaaa
1qgo_A_371qgo   A4148AFTSGMIIEE--HHHHbbaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a9x_A_10391a9x   A     ORNORNITHINE H - 1039
1a9x_A_10391a9x   A     ORNORNITHINE Y - 1040
1a9x_A_10391a9x   A     ORNORNITHINE D - 1041
1a9x_A_10391a9x   A     ORNORNITHINE T - 1042
1a9x_A_10391a9x   A     ORNORNITHINE T - 1043
1a9x_A_10391a9x   A     ORNORNITHINE G - 1046
1b24_A_341b24   A     MSESELENOMETHIONINE V - 38
1b24_A_341b24   A     MSESELENOMETHIONINE I - 40
1d2n_A_6471d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER T - 653
1d2n_A_6471d2n   A     MGMAGNESIUM ION T - 653
1d2n_A_6471d2n   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER S - 655
1d2n_A_6471d2n   A     MGMAGNESIUM ION S - 655
1gqe_A_3411gqe   A     MSESELENOMETHIONINE T - 345
1gqe_A_3411gqe   A     MSESELENOMETHIONINE A - 347
1gqe_A_3411gqe   A     MSESELENOMETHIONINE V - 348
1gqe_A_3411gqe   A     MSESELENOMETHIONINE L - 349
1gvf_A_781gvf   A     EGLETHYLENE GLYCOL A - 78
1gvf_A_781gvf   A     EGLETHYLENE GLYCOL L - 79
1gvf_A_781gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE D - 82
1gvf_A_781gvf   A     ZNZINC ION D - 82
1gvf_A_781gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE H - 83
1gvf_A_781gvf   A     ZNZINC ION H - 83
1gvf_A_781gvf   A     EGLETHYLENE GLYCOL V - 94
1gvf_A_781gvf   A     EGLETHYLENE GLYCOL H - 95
1jf8_A_771jf8   A     BCTBICARBONATE ION C - 82
1mgp_A_1831mgp   A     MSESELENOMETHIONINE F - 183
1mgp_A_1831mgp   A     PLMPALMITIC ACID K - 184
1mgp_A_1831mgp   A     PLMPALMITIC ACID A - 185
1mgp_A_1831mgp   A     PLMPALMITIC ACID I - 186
1mgp_A_1831mgp   A     MSESELENOMETHIONINE F - 187
1mgp_A_1831mgp   A     PLMPALMITIC ACID F - 187
1mgp_A_1831mgp   A     PLMPALMITIC ACID L - 195
1mw5_A_1231mw5   A     MSESELENOMETHIONINE Y - 124
1mw5_A_1231mw5   A     MSESELENOMETHIONINE L - 126
1mw5_A_1231mw5   A     MSESELENOMETHIONINE L - 127
1mw5_A_1231mw5   A     MSESELENOMETHIONINE P - 128
1mw5_A_1231mw5   A     MSESELENOMETHIONINE L - 137
1naq_A_111naq   A     HGMERCURY (II) ION C - 16
1naq_A_111naq   A     MBOMERCURIBENZOIC ACID C - 16
1naq_A_111naq   A     HGMERCURY (II) ION T - 17
1naq_A_111naq   A     MBOMERCURIBENZOIC ACID T - 17
1naq_A_111naq   A     HGMERCURY (II) ION A - 18
1naq_A_111naq   A     MBOMERCURIBENZOIC ACID A - 18
1naq_A_111naq   A     MBOMERCURIBENZOIC ACID P - 19
1naq_A_111naq   A     MBOMERCURIBENZOIC ACID T - 23
1naq_A_111naq   A     HGMERCURY (II) ION L - 27
1naq_A_111naq   A     MBOMERCURIBENZOIC ACID L - 27
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvf_A_781gvf   A AC1PGC BINDING SITE FOR CHAIN AD - 82
1gvf_A_781gvf   A AC1PGC BINDING SITE FOR CHAIN AH - 83

Clusters included in this Subclass
CLUSTER: EH.1.96
CLUSTER: EH.2.39