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| Information on SUBCLASS 2.3.1 |
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Subclass Accession number: 107
Subclass: 2.3.1 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 15 Average sequence ID (%) : 13.5 +/- 1.1 Average RMSD (Å) : 0.57 +/- 0.22 Consensus geometry
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| Consensus Sequence: | ppXhXh |
| (φψ)-conformation: | aagpbb |
| Pattern: | x | x | x | {AILVY} | x | x | {ACFILVY} | x | {DEKQRSTY} | {DEKNQRSY} | {GN} | {ACGLVY} | x | {AFILV} | x |
| Conservation: | -0.399 | -0.763 | -0.440 | -0.075 | 0.019 | -0.537 | -0.073 | -0.464 | 0.376 | -0.539 | 3.149 | -0.938 | -0.632 | 0.825 | 0.492 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1b7b_A_136 | 1b7b | A | 136 | 150 | EAEAKEAMQAGAIFK | HHHHHHHHTTT--EE | aaaaaaaaaagbbbb |
| 1b7b_A_21 | 1b7b | A | 32 | 46 | SAYLVHLIKQGHRLI | HHHHHHHHHTT-EEE | aaaaaaaaaavxxxb |
| 1d6j_B_77 | 1d6j | B | 88 | 102 | AEVAKLFADSNSIAI | HHHHHHHHHTT-EEE | aaaaaaaaaavbbxb |
| 1e19_A_176 | 1e19 | A | 176 | 190 | AETIKKLVERGVIVI | HHHHHHHHHTT-EEE | aaaaaaaaaavxxbb |
| 1e19_A_23 | 1e19 | A | 34 | 48 | ARQIAEIIARGYEVV | HHHHHHHHHTT-EEE | aaaaaaaaaavxxbb |
| 1e9e_A_80 | 1e9e | A | 80 | 94 | VPLIKEKLSQGVTLV | HHHHHHHHHTT-EEE | aaaaaaaaaagxxbb |
| 1hdi_A_349 | 1hdi | A | 355 | 369 | MDEVVKATSRGCITI | HHHHHHHHHTT-EEE | aaaaaaaaaagxxbb |
| 1hdi_A_37 | 1hdi | A | 43 | 57 | VPSIKFCLDDGAKSV | HHHHHHHHHTT-SEE | aaaaaaaaaavpabb |
| 1i58_B_507 | 1i58 | B | 508 | 522 | DVVKNVVESLNGSIS | HHHHHHHHHTT-EEE | aaaaaaaaaavbbbb |
| 1ig0_B_103 | 1ig0 | B | 103 | 117 | EKVYKYYRKNKVTII | HHHHHHHHHTT-EEE | aaaaaaaaaalxxbb |
| 1ig3_B_97 | 1ig3 | B | 97 | 111 | PEVKEYYTKKGCDLI | HHHHHHHHHTT-EEE | aaaaaaaaaavxxbb |
| 1jb1_A_161 | 1jb1 | A | 162 | 176 | SETALELVQRGHRLI | HHHHHHHHHTT-EEE | aaaaaaaaaavxxxa |
| 1jm6_A_1321 | 1jm6 | A | 1323 | 1337 | PISRLYAKYFQGDLQ | HHHHHHHHHTT-EEE | aaaaaaaaaavbbbb |
| 1pfk_A_16 | 1pfk | A | 21 | 35 | RGVVRSALTEGLEVM | HHHHHHHHHTT-EEE | aaaaaaaaaavxbbb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1pfk_A_16 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 21 |
| 1pfk_A_16 | 1pfk | A | MGMAGNESIUM ION | R - 21 |
| 1pfk_A_16 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 25 |
| 1pfk_A_16 | 1pfk | A | MGMAGNESIUM ION | R - 25 |
| Bibliographic annotations |
| Loop | PDB | Chain | Annotation | Residue |
| 1b7b_A_21 | 1b7b RefA.MARINA,P.M.ALZARI,J.BRAVO,M.URIARTE,B.BARCELONA,I.FITA,V.RUBIO. CARBAMATE KINASE: NEW STRUCTURAL MACHINERY FOR MAKING CARBAMOYL PHOSPHATE, THE COMMON PRECURSOR OF PYRIMIDINES AND ARGININE PROTEIN SCI. v.8;934,1999 | A | CONSERVED RESIDUE | H - 49 |
| 1d6j_B_77 | 1d6j RefI.J.MACRAE,I.H.SEGEL,A.J.FISHER. CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM PENICILLIUM CHRYSOGENUM BIOCHEMISTRY v.39;1613,2000 | B | MONOMER-MONOMER INTERACTION RESIDUE | R - 85 |
| 1d6j_B_77 | 1d6j RefI.J.MACRAE,I.H.SEGEL,A.J.FISHER. CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM PENICILLIUM CHRYSOGENUM BIOCHEMISTRY v.39;1613,2000 | B | MONOMER-MONOMER INTERACTION RESIDUE | V - 90 |
| 1d6j_B_77 | 1d6j RefI.J.MACRAE,I.H.SEGEL,A.J.FISHER. CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM PENICILLIUM CHRYSOGENUM BIOCHEMISTRY v.39;1613,2000 | B | MONOMER-MONOMER INTERACTION RESIDUE | L - 93 |
| Clusters included in this Subclass |
| CLUSTER: HE.4.13 |
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