|
|
|
|
|
|
|
| Information on SUBCLASS 2.3.2 |
|
Subclass Accession number: 108
Subclass: 2.3.2 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 7 Average sequence ID (%) : 30.3 +/- 5.2 Average RMSD (Å) : 0.54 +/- 0.36 Consensus geometry
|
| Consensus Sequence: | ppGhph |
| (φψ)-conformation: | aagpbp |
| Pattern: | {DEKNT} | [ILV] | {IMV} | [DKNQS] | {KR} | [AFWY] | [AE] | {DEQR} | {KNR} | [G] | [FILVY] | {EKRT} | {ILP} | {LTV} |
| Conservation: | -0.680 | 0.776 | -0.285 | -0.263 | 0.053 | 0.211 | 0.253 | -0.383 | -0.350 | 3.089 | -0.086 | -0.703 | -0.928 | -0.705 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1be4_A_21 | 1be4 | A | 23 | 36 | EIIKRFEQKGFRLV | HHHHHHHHHT-EEE | aaaaaaaaagpxxa |
| 1ehw_B_21 | 1ehw | B | 23 | 36 | DVIQRFERRGFTLV | HHHHHHHHHT-EEE | aaaaaaaaavxbxa |
| 1hdi_A_265 | 1hdi | A | 267 | 280 | NLMSKAAANGVKIT | HHHHHHHHHT-EEE | aaaaaaaaavxxxb |
| 1k47_A_306 | 1k47 | A | 311 | 324 | TLKNRWADLGIELL | HHHHHHHHTT-EEE | aaaaaaaaavxxxa |
| 1nhk_R_20 | 1nhk | R | 22 | 35 | KIISRFEEKGLKPV | HHHHHHHHTT-EEE | aaaaaaaaavxx-a |
| 1nue_A_21 | 1nue | A | 23 | 36 | EIIKRFEQKGFRLV | HHHHHHHHHT-EEE | aaaaaaaaagxxxa |
| 1zin_*_181 | 1zin | - | 181 | 194 | PLVDFYEQKGYLRN | HHHHHHHHHT-EEE | aaaaaaaaavaxbx |
| Bibliographic annotations |
| Loop | PDB | Chain | Annotation | Residue |
| 1nhk_R_20 | 1nhk RefR.L.WILLIAMS,D.A.OREN,J.MUNOZ-DORADO,S.INOUYE,E.ARNOLD. CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUSTRATE AT 2.0 A RESOLUTION J.MOL.BIOL. v.234;1230,1993 | R | SUBSTRATE BINDING RESIDUE | G - 21 |
| Clusters included in this Subclass |
| CLUSTER: HE.1.5 |
| CLUSTER: HE.2.15 |
| CLUSTER: HE.3.8 |
| For any comment or web-related incidence, send an email to the webmaster. |
|