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Information on SUBCLASS 2.5.4
Subclass Accession number: 1114
Subclass: 2.5.4 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 53719 (>75 %)  53720 (>75 %)  53721 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 24.4 +/- 20.4
Average RMSD (Å) : 0.650 +/- 0.311

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XpGXhh
(φψ)-conformation: bbepaa
Pattern: [AFI][HIV]xx[HT][G]x[LV][AEG][ACGV][AG]xx
Conservation:-0.422-0.149-0.919-0.2870.4662.663-0.6520.574-0.147-0.5831.069-0.770-0.844
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ez0_A_2241ez0   A224236AVGFTGSVGGGRAEEEEES-HHHHHHbbbbbexaaaaaa
1iir_A_961iir   A96108AVVTTGLLAAAIGEEEEES-HHHHHHbbbbbepaaaaaa
1m1n_A_791m1n   A7991IHISHGPVGCGQYEEEEESSSHHHHHbbxxbexaaaaaa
1uzb_A_2551uzb   A255267FINFTGSLEVGLKEEEEES-HHHHHHbbbbbexaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE F - 227
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 228
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 229
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 230
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 231
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 232
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 233
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 234
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 236
1ez0_A_2241ez0   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 237
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER G - 84
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER P - 85
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER V - 86
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER G - 87
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER C - 88
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER G - 89
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER Y - 91
1uzb_A_2551uzb   A     MRD(4R)-2-METHYLPENTANE-2,4-DIOL L - 262
1uzb_A_2551uzb   A     MRD(4R)-2-METHYLPENTANE-2,4-DIOL L - 266

Clusters included in this Subclass
CLUSTER: EH.2.148