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Information on SUBCLASS 3.6.2
Subclass Accession number: 1173
Subclass: 3.6.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  1.1 (>50 %)  1.1.1 (>50 %)  1.1.1.28
GO : GO:0008720 (>50 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  
SCOP : 52171 (>75 %)  52283 (>75 %)  52284 (>75 %)  
Number of loops: 19

Average sequence ID (%) : 12.1 +/- 15.2
Average RMSD (Å) : 0.568 +/- 0.254

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XpXXXhX
(φψ)-conformation: bbappaa
Pattern: [cfgimvy]x[stv][adgnpstv]x[aenpst][agimpvy][adegqrst][adekqst]x
Conservation:0.329-0.8712.179-0.174-1.5770.834-0.360-0.144-0.135-0.081
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cc8_A_441cc8   A4756VYTTLPYDFIEEESS-HHHHbbbaxxaaaa
1em2_A_2801em2   A287296TFLPCPAELVEEESS-HHHHbxbabxaaaa
1fe0_A_391fe0   A4251IESEHSMDTLEEESS-HHHHbbbaxxaaaa
1i4j_A_31i4j   A817RYVRISPRKVEEESS-HHHHblxabpaaaa
1j9j_A_621j9j   A6574YSTTGTPADCEEESS-HHHHbbbaxxaaaa
1kcm_A_31kcm   A918VILPVSVDEYEEESS-HHHHbxbabxaaaa
1l5x_A_621l5x   A6473IATSGTPSDTEEESS-HHHHbxbaxxaaaa
1n8j_A_651n8j   A6978SVSTDTHFTHEEESS-HHHHxbbaxxaaaa
1nrw_A_1091nrw   A109118IYTPQNGRELEEE---HHHHbxbaxxaaaa
1ntv_A_1371ntv   A141150IKTAQAAEPVEEESS-SHHHbbxabpaaaa
1q98_A_761q98   A8089CISADLPFAQEEESS-HHHHxbbaxxaaaa
1qmv_A_701qmv   A7483GVSVDSQFTHEEESS-HHHHbbbaxxaaaa
1qq5_A_1091qq5   A112121ILSNGAPDMLEEESS-HHHHbbbapxaaaa
1qup_A_481qup   A4857VESSVAPSTIEEESS-HHHHbbbaxpaaaa
1qyi_A_2331qyi   A236245IATGRPYTETEE-SS-HHHHbbbaxxaaaa
1su4_A_6201su4   A623632MITGDNKGTAEEESS-HHHHxbbaxxaaaa
1vjh_A_41vjh   A1120FDVKCPADKFEEESS-HHHHbbbaxxaaaa
1vrt_A_1861vrt   A189198VGSDLEIGQHEEE-S-HHHHbbbaxxaaaa
1zrn_*_1131zrn   -116125ILSNGSPQSIEEESS-HHHHbbbaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1em2_A_2801em2   A     MSESELENOMETHIONINE F - 283
1em2_A_2801em2   A     MSESELENOMETHIONINE I - 284
1em2_A_2801em2   A     MSESELENOMETHIONINE L - 285
1em2_A_2801em2   A     MSESELENOMETHIONINE E - 299
1l5x_A_621l5x   A     GOLGLYCEROL R - 62
1l5x_A_621l5x   A     GOLGLYCEROL A - 63
1l5x_A_621l5x   A     MSESELENOMETHIONINE I - 64
1l5x_A_621l5x   A     GOLGLYCEROL I - 64
1l5x_A_621l5x   A     MSESELENOMETHIONINE A - 65
1l5x_A_621l5x   A     MSESELENOMETHIONINE T - 66
1l5x_A_621l5x   A     MSESELENOMETHIONINE S - 67
1l5x_A_621l5x   A     MSESELENOMETHIONINE L - 76
1l5x_A_621l5x   A     GOLGLYCEROL L - 76
1l5x_A_621l5x   A     MSESELENOMETHIONINE A - 77
1l5x_A_621l5x   A     GOLGLYCEROL A - 77
1l5x_A_621l5x   A     GOLGLYCEROL T - 78
1l5x_A_621l5x   A     MSESELENOMETHIONINE F - 79
1l5x_A_621l5x   A     MSESELENOMETHIONINE G - 80
1l5x_A_621l5x   A     GOLGLYCEROL G - 80
1l5x_A_621l5x   A     GOLGLYCEROL L - 81
1nrw_A_1091nrw   A     PO4PHOSPHATE ION R - 125
1nrw_A_1091nrw   A     CACALCIUM ION A - 129
1ntv_A_1371ntv   A     PO4PHOSPHATE ION K - 142
1qmv_A_701qmv   A     CSD3-SULFINOALANINE W - 86
1qq5_A_1091qq5   A     FMTFORMIC ACID I - 112
1qq5_A_1091qq5   A     FMTFORMIC ACID L - 113
1qq5_A_1091qq5   A     FMTFORMIC ACID S - 114
1qq5_A_1091qq5   A     FMTFORMIC ACID N - 115
1qq5_A_1091qq5   A     FMTFORMIC ACID G - 116
1qq5_A_1091qq5   A     FMTFORMIC ACID L - 121
1qup_A_481qup   A     MSESELENOMETHIONINE V - 48
1qup_A_481qup   A     MSESELENOMETHIONINE I - 57
1qup_A_481qup   A     MSESELENOMETHIONINE L - 61
1qyi_A_2331qyi   A     MSESELENOMETHIONINE E - 233
1vjh_A_41vjh   A     MSESELENOMETHIONINE F - 21
1vjh_A_41vjh   A     MSESELENOMETHIONINE F - 24
1vjh_A_41vjh   A     MSESELENOMETHIONINE V - 25
1vrt_A_1861vrt   A     NEVNEVIRAPINE Y - 188
1vrt_A_1861vrt   A     NEVNEVIRAPINE V - 189
1vrt_A_1861vrt   A     NEVNEVIRAPINE G - 190
1vrt_A_1861vrt   A     NEVNEVIRAPINE S - 191

Clusters included in this Subclass
CLUSTER: EH.2.163
CLUSTER: EH.3.127
CLUSTER: EH.3.139
CLUSTER: EH.3.85
CLUSTER: EH.4.29