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Information on SUBCLASS 3.8.4
Subclass Accession number: 1189
Subclass: 3.8.4 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 9.0 +/- 13.8
Average RMSD (Å) : 0.725 +/- 0.222

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XhXXpXp
(φψ)-conformation: bbppbaa
Pattern: xxx[AFI]xx[DENT][ADE][EKS]x[ILTV][EKM][AC]
Conservation:-0.585-0.904-0.505-0.133-1.063-1.3020.4520.7751.051-0.9040.5320.4582.127
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1epu_A_651epu   A7183VYLITPTEESVKCEEEE---HHHHHHbxbbxxbaaaaaa
1m1h_A_1381m1h   A140152LIKAHMNDKLLMAEEEE---HHHHHHbbbbxxbaaaaaa
1m5w_A_1291m5w   A131143SLFIDADEEQIKAEEEE-S-HHHHHHbbxbxxbaaaaaa
1mrj_*_791mrj   -7991TSYFFNEASATEAEEEE-SSHHHHHHbbbbxxbaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1epu_A_651epu   A     MSESELENOMETHIONINE L - 73
1epu_A_651epu   A     MSESELENOMETHIONINE E - 78
1epu_A_651epu   A     MSESELENOMETHIONINE S - 80
1epu_A_651epu   A     MSESELENOMETHIONINE V - 81
1epu_A_651epu   A     MSESELENOMETHIONINE K - 82
1epu_A_651epu   A     MSESELENOMETHIONINE C - 83
1m5w_A_1291m5w   A     DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE F - 133
1mrj_*_791mrj   *     ADNADENOSINE F - 83
1mrj_*_791mrj   *     ADNADENOSINE E - 85

Clusters included in this Subclass
CLUSTER: EH.2.161