Information on SUBCLASS 3.8.4 |
Subclass Accession number: 1189
Subclass: 3.8.4 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 9.0 +/- 13.8 Average RMSD (Å) : 0.725 +/- 0.222 Consensus geometry
|
Consensus Sequence: | XhXXpXp |
(φψ)-conformation: | bbppbaa |
Pattern: | x | x | x | [AFI] | x | x | [DENT] | [ADE] | [EKS] | x | [ILTV] | [EKM] | [AC] |
Conservation: | -0.585 | -0.904 | -0.505 | -0.133 | -1.063 | -1.302 | 0.452 | 0.775 | 1.051 | -0.904 | 0.532 | 0.458 | 2.127 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1epu_A_65 | 1epu | A | 71 | 83 | VYLITPTEESVKC | EEEE---HHHHHH | bxbbxxbaaaaaa |
1m1h_A_138 | 1m1h | A | 140 | 152 | LIKAHMNDKLLMA | EEEE---HHHHHH | bbbbxxbaaaaaa |
1m5w_A_129 | 1m5w | A | 131 | 143 | SLFIDADEEQIKA | EEEE-S-HHHHHH | bbxbxxbaaaaaa |
1mrj_*_79 | 1mrj | - | 79 | 91 | TSYFFNEASATEA | EEEE-SSHHHHHH | bbbbxxbaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1epu_A_65 | 1epu | A | MSESELENOMETHIONINE | L - 73 |
1epu_A_65 | 1epu | A | MSESELENOMETHIONINE | E - 78 |
1epu_A_65 | 1epu | A | MSESELENOMETHIONINE | S - 80 |
1epu_A_65 | 1epu | A | MSESELENOMETHIONINE | V - 81 |
1epu_A_65 | 1epu | A | MSESELENOMETHIONINE | K - 82 |
1epu_A_65 | 1epu | A | MSESELENOMETHIONINE | C - 83 |
1m5w_A_129 | 1m5w | A | DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE | F - 133 |
1mrj_*_79 | 1mrj | * | ADNADENOSINE | F - 83 |
1mrj_*_79 | 1mrj | * | ADNADENOSINE | E - 85 |
Clusters included in this Subclass |
CLUSTER: EH.2.161 |