Information on SUBCLASS 3.8.6 |
Subclass Accession number: 1191
Subclass: 3.8.6 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>50 %) |
Number of loops: 3 Average sequence ID (%) : 8.3 +/- 9.0 Average RMSD (Å) : 0.833 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXXXpXp |
(φψ)-conformation: | bbppbaa |
Pattern: | x | [ITV] | [LV] | x | x | x | x | x | [DET] | [EKL] | [DE] | [LY] | x | x | [ES] | x | [AKQ] | [KNQ] | x | [LW] |
Conservation: | -0.864 | 0.579 | 1.356 | -0.420 | -0.864 | -0.975 | -1.086 | -0.420 | 0.468 | -0.642 | 2.458 | 0.793 | -0.642 | -0.864 | 1.332 | -0.864 | 0.024 | 0.690 | -0.864 | 0.806 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mk0_A_56 | 1mk0 | A | 59 | 78 | SILEEIPYEKDLIIERANFW | EEEEE----HHHHHHHHHHH | bxabxbpxbaaaaaaaaaaa |
1nrj_A_84 | 1nrj | A | 87 | 106 | FVVTFAEQTLELNQETQQTL | EEEEESS--HHHHHHHHHHH | bbbbbxxxbaaaaaaaaaaa |
1v39_*_109 | 1v39 | - | 109 | 128 | VTLVTRFVDEEYLRSIKKQL | EEEEE----HHHHHHHHHHH | bbxbbbxxbaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mk0_A_56 | 1mk0 | A | CITCITRIC ACID | Y - 66 |
1mk0_A_56 | 1mk0 | A | CITCITRIC ACID | A - 75 |
1mk0_A_56 | 1mk0 | A | CITCITRIC ACID | I - 79 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | R - 114 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 115 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 116 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 117 |
Clusters included in this Subclass |
CLUSTER: EH.3.223 |