Information on SUBCLASS 3.9.2 |
Subclass Accession number: 1196
Subclass: 3.9.2 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005525 (>50 %) GO:0019001 (>50 %) SCOP : 52539 (>50 %) 52540 (>50 %) 52592 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 9.5 +/- 10.6 Average RMSD (Å) : 1.200 +/- 0.100 Consensus geometry
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Consensus Sequence: | hhXXpXp |
(φψ)-conformation: | bbaabaa |
Pattern: | [HI] | x | x | [CFI] | [AMV] | [CER] | x | [DQR] | [PS] | [DST] | [HVW] | [RSY] | x | [CEK] | [LV] | x | [EKR] | [AL] | [CLV] | [HKR] | [KRY] |
Conservation: | -0.117 | 0.010 | -1.280 | 0.060 | 0.060 | -1.131 | -0.089 | 0.208 | 2.239 | 0.357 | -0.834 | -0.983 | -1.578 | -0.834 | 1.698 | -1.011 | 1.250 | 0.457 | 0.357 | 1.102 | 0.060 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4m_A_147 | 1a4m | A | 151 | 171 | ILCCMRHQPSWSLEVLELCKK | EEEEETT-GGGHHHHHHHHHH | bxxxbaabaaaaaaaaaaaaa |
1dp4_A_182 | 1dp4 | A | 185 | 205 | HQEFVEGDPDHYPKLLRAVRR | EEEE-TT-GGGHHHHHHHHHH | bbxbbaabaaaaaaaaaaaaa |
1fo8_A_110 | 1fo8 | A | 110 | 130 | ILVIACDRSTVRRCLDKLLHY | EEEEESS-TTHHHHHHHHHHH | bbxxbIabaaaaaFgaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a4m_A_147 | 1a4m | A | PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE | C - 153 |
1a4m_A_147 | 1a4m | A | PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE | M - 155 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | I - 110 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | V - 112 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | T - 119 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | V - 120 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | R - 122 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | C - 123 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | L - 124 |
1fo8_A_110 | 1fo8 | A | MMCMETHYL MERCURY ION | L - 127 |
Clusters included in this Subclass |
CLUSTER: EH.6.243 |