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Information on SUBCLASS 3.9.2
Subclass Accession number: 1196
Subclass: 3.9.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005525 (>50 %)  GO:0019001 (>50 %)  
SCOP : 52539 (>50 %)  52540 (>50 %)  52592 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 9.5 +/- 10.6
Average RMSD (Å) : 1.200 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hhXXpXp
(φψ)-conformation: bbaabaa
Pattern: [HI]xx[CFI][AMV][CER]x[DQR][PS][DST][HVW][RSY]x[CEK][LV]x[EKR][AL][CLV][HKR][KRY]
Conservation:-0.1170.010-1.2800.0600.060-1.131-0.0890.2082.2390.357-0.834-0.983-1.578-0.8341.698-1.0111.2500.4570.3571.1020.060
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4m_A_1471a4m   A151171ILCCMRHQPSWSLEVLELCKKEEEEETT-GGGHHHHHHHHHHbxxxbaabaaaaaaaaaaaaa
1dp4_A_1821dp4   A185205HQEFVEGDPDHYPKLLRAVRREEEE-TT-GGGHHHHHHHHHHbbxbbaabaaaaaaaaaaaaa
1fo8_A_1101fo8   A110130ILVIACDRSTVRRCLDKLLHYEEEEESS-TTHHHHHHHHHHHbbxxbIabaaaaaFgaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a4m_A_1471a4m   A     PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE C - 153
1a4m_A_1471a4m   A     PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE M - 155
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION I - 110
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION V - 112
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION T - 119
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION V - 120
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION R - 122
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION C - 123
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION L - 124
1fo8_A_1101fo8   A     MMCMETHYL MERCURY ION L - 127

Clusters included in this Subclass
CLUSTER: EH.6.243