Information on SUBCLASS 2.2.2 |
Subclass Accession number: 122
Subclass: 2.2.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 50 Average sequence ID (%) : 17.0 +/- 16.2 Average RMSD (Å) : 0.592 +/- 0.215 Consensus geometry
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Consensus Sequence: | pXGhph |
(φψ)-conformation: | aagpbb |
Pattern: | x | x | x | [acfgilmvwy] | [adegkqrst] | [adegknqrst] | x | [DEG] | [acfgilmvy] | [adegknqrst] | [acfgilpvy] | x |
Conservation: | -0.543 | -0.368 | -0.580 | -0.194 | -0.053 | -0.152 | -0.477 | 3.117 | -0.268 | -0.081 | -0.017 | -0.385 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b33_N_33 | 1b33 | N | 40 | 51 | QQRIQKMGGKIV | HHHHHHTT-EEE | aaaaaaavxbxa |
1b74_A_122 | 1b74 | A | 124 | 135 | QRKLEEGGADVF | HHHHHTTS-EEE | aaaaaaavbxxb |
1b8o_A_222 | 1b8o | A | 225 | 236 | VIVARHCGLRVF | HHHHHHTT-EEE | aaaaaaavxxbb |
1bup_A_152 | 1bup | A | 159 | 170 | KDAGTIAGLNVL | HHHHHHTT-EEE | aaaaaaavxbxa |
1byf_A_14 | 1byf | A | 18 | 28 | GTYCQSRGMAL. | HHHHHTTT-EE. | aaaaaaavbbp. |
1cc8_A_53 | 1cc8 | A | 57 | 68 | LEKIKKTGKEVR | HHHHHTTSS-EE | aaaaaaavxxxa |
1ecs_A_14 | 1ecs | A | 18 | 29 | AAFYERLGFGIV | HHHHHTTT-EEE | aaaaaaavxbxa |
1ejd_A_232 | 1ejd | A | 239 | 250 | LVAAAISGGKIV | HHHHHTTT-EEE | aaaaaaavxbbb |
1f1u_A_163 | 1f1u | A | 167 | 178 | RAYLEDLGFRVS | HHHHHHTT-EEE | aaaaaaagxbxa |
1f9z_A_13 | 1f9z | A | 18 | 29 | DFYTKVLGMKLL | HHHHHTT--EEE | aaaaaaavxbxa |
1f9z_A_82 | 1f9z | A | 86 | 97 | CEKIRQNGGNVT | HHHHHHTT-EEE | aaaaaaagpbba |
1fs0_G_91 | 1fs0 | G | 103 | 114 | MKTWTDKGVQCD | HHHHHHTT-EEE | aaaaaaavxxbb |
1g2o_A_210 | 1g2o | A | 213 | 224 | TIAARAAGAEVL | HHHHHHTT-EEE | aaaaaaavbxbb |
1g2q_A_136 | 1g2q | A | 142 | 153 | GELVEQLEANLL | HHHHHHTT-EEE | aaaaaaavbbxa |
1g3q_A_145 | 1g3q | A | 155 | 166 | GIVLKKAGLAIL | HHHHHHTT-EEE | aaaaaaagxxxa |
1g41_A_352 | 1g41 | A | 357 | 368 | KALMATEGVNIA | HHHHHTTT-EEE | aaaaaaavbbbb |
1g60_A_76 | 1g60 | A | 83 | 94 | CQYLVSKGMIFQ | HHHHHHTT-EEE | aaaaaaavxbxa |
1hnn_A_236 | 1hnn | A | 240 | 251 | REALVRSGYKVR | HHHHHHTTEEEE | aaaaaaavbxxa |
1itw_A_13 | 1itw | A | 27 | 38 | KAFTGSSGIAVE | HHHHHTTT-EEE | aaaaaaavbbbb |
1jif_A_16 | 1jif | A | 21 | 32 | SFWVDTLGFEKD | HHHHHTT--EEE | aaaaaaavxbxa |
1jr2_A_18 | 1jr2 | A | 20 | 31 | IRELGLYGLEAT | HHHHHTTT-EEE | aaaaaaavxxbb |
1js3_A_219 | 1js3 | A | 226 | 237 | LERDKAAGLIPF | HHHHHHTT-EEE | aaaaaaavxbxa |
1k47_A_306 | 1k47 | A | 313 | 324 | KNRWADLGIELL | HHHHHHTT-EEE | aaaaaaavxxxa |
1k87_A_265 | 1k87 | A | 272 | 283 | ARKLEEKGFRYS | HHHHHTTT-EEE | aaaaaaagxbbb |
1kaf_A_169 | 1kaf | A | 172 | 183 | IQKFTDIGMSCK | HHHHHTTT-EEE | aaaaaaagxxbb |
1kll_A_82 | 1kll | A | 89 | 100 | YAELVDAGYEGH | HHHHHHTT-EEE | aaaaaaagxxxa |
1kpg_A_212 | 1kpg | A | 212 | 223 | QECASANGFTVT | HHHHHTTT-EEE | aaaaaaavbbxa |
1l5j_A_451 | 1l5j | A | 461 | 471 | PDFIMNRGGVS. | HHHHHTTT-EE. | aaaaaaavxbb. |
1lh0_A_1132 | 1lh0 | A | 1137 | 1148 | MEIIQAHGATLA | HHHHHHTT-EEE | aaaaaaavxbxa |
1lhp_A_21 | 1lhp | A | 25 | 36 | TFPLQVLGFEVD | HHHHHHTT-EEE | aaaaaaavxxbb |
1m1n_A_364 | 1m1n | A | 364 | 375 | IGAYEDLGMEVV | HHHHHTTT-EEE | aaaaaaavxbxa |
1m1n_B_373 | 1m1n | B | 380 | 391 | VKFLLELGCEPV | HHHHHHTT-EEE | aaaaaaavxbwa |
1m7y_A_320 | 1m7y | A | 342 | 352 | VSGLQKSGISC. | HHHHHTTT-EE. | aaaaaaavbbb. |
1mkz_A_28 | 1mkz | A | 34 | 45 | RDSAQEAGHHVV | HHHHHHTT-EEE | aaaaaaagxbxa |
1nox_*_125 | 1nox | - | 144 | 155 | LLLLEAYGLGSV | HHHHHHTT-EEE | aaaaaaavbxbb |
1o98_A_411 | 1o98 | A | 429 | 440 | VDAILAKGGIAI | HHHHHHTT-EEE | aaaaaaavxbbb |
1qip_A_41 | 1qip | A | 46 | 57 | DFYTRVLGMTLI | HHHHHTT--EEE | aaaaaaavxbxa |
1qo0_A_151 | 1qo0 | A | 161 | 172 | RHLYRQHGGTVL | HHHHHTTT-EEE | aaaaaaavxbxa |
1riq_A_394 | 1riq | A | 398 | 408 | DEIAREKGLGI. | HHHHHTTT-EE. | aaaaaaavxbb. |
1ro2_A_221 | 1ro2 | A | 229 | 239 | AEKGKRLGITL. | HHHHGGGT-EE. | aaaaaaavxbx. |
1rtq_A_156 | 1rtq | A | 162 | 173 | ANQYKSEGKNVV | HHHHHHTT-EEE | aaaaaaavxxxa |
1s9r_A_51 | 1s9r | A | 62 | 73 | VAELKANDINVV | HHHHHTTT-EEE | aaaaaaalbxxb |
1scj_B_323 | 1scj | B | 327 | 338 | KDVISQKGGKVE | HHHHHTTT-EEE | aaaaaaagpbxa |
1tca_*_52 | 1tca | - | 53 | 64 | IPLSTQLGYTPC | HHHHHTTT-EEE | aaaaaaagxbwb |
1tgo_A_507 | 1tgo | A | 526 | 537 | REIEEKFGFKVL | HHHHHTT--EEE | aaaaaaavxbxa |
1ufk_A_224 | 1ufk | A | 228 | 239 | REAMAGAGFRPL | HHHHHHTT-EEE | aaaaaaavxbwa |
1uiu_A_351 | 1uiu | A | 361 | 372 | RADMRQIGADVS | HHHHHTTT-EEE | aaaaaaagbxxx |
1v7r_A_10 | 1v7r | A | 17 | 28 | ANFLGTFGIEIV | HHHHHTTT-EEE | aaaaaaavbbxb |
1xgs_A_129 | 1xgs | A | 136 | 146 | ENEIRKRGFKP. | HHHHHTTT-EE. | aaaaaaavbbx. |
6mht_A_23 | 6mht | A | 25 | 36 | RLALESCGAECV | HHHHHTTT-EEE | aaaaaaavxbxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1qip_A_41 | 1qip | A | HD2HYDROPHOBIC SUBSTRATE BINDING POCKET AT DIMER INTERFACE. | C - 60 |
1qip_A_41 | 1qip | A | HD2HYDROPHOBIC SUBSTRATE BINDING POCKET AT DIMER INTERFACE. | F - 62 |
1qo0_A_151 | 1qo0 | A | LGABUTYRAMIDE BINDING SITE | Y - 152 |
Clusters included in this Subclass |
CLUSTER: HE.2.46 |
CLUSTER: HE.3.45 |
CLUSTER: HE.3.84 |
CLUSTER: HE.4.13 |
CLUSTER: HE.4.152 |
CLUSTER: HE.5.111 |
CLUSTER: HE.5.5 |