Information on SUBCLASS 3.4.2 |
Subclass Accession number: 127
Subclass: 3.4.2 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 3 Average sequence ID (%) : 24.2 +/- 2.4 Average RMSD (Å) : 0.60 +/- 0.23 Consensus geometry
|
Consensus Sequence: | XXXPpXX |
(φψ)-conformation: | aabaabb |
Pattern: | x | [ST] | x | x | x | x | x | [ST] | [CLV] | x | x | [EL] | x | [P] | [DK] | [CS] | x | [V] | x | [FL] | [IL] | [LV] |
Conservation: | -0.386 | 0.426 | -0.640 | -1.513 | -0.597 | 0.069 | -0.456 | 0.566 | -0.245 | -0.316 | -1.020 | -0.780 | -1.020 | 3.135 | 0.215 | 1.131 | -0.597 | 1.234 | -0.668 | 0.501 | 0.631 | 0.330 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bdg_*_209 | 1bdg | - | 209 | 230 | DTVGTLASCALEDPKCAVGLIV | HHHHHHHHHHTT-TTEEEEEEE | aaaaaaaaaaaabaaxabbxbb |
1cza_N_423 | 1cza | N | 423 | 444 | YSRRFHKTLRRLVPDSDVRFLL | HHHHHHHHHHHH-TTEEEEEEE | aaaaaaaaaaaabaabbbbbbx |
1cza_N_871 | 1cza | N | 871 | 892 | FSRIMHQTVKELSPKCNVSFLL | HHHHHHHHHHHHSTTEEEEEEE | aaaaaaaaaaaabaabbbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bdg_*_209 | 1bdg | * | GLCGLUCOSE | D - 209 |
1bdg_*_209 | 1bdg | * | GLCGLUCOSE | T - 210 |
1bdg_*_209 | 1bdg | * | GLCGLUCOSE | I - 229 |
1cza_N_423 | 1cza | N | ADPADENOSINE-5'-DIPHOSPHATE | R - 425 |
1cza_N_423 | 1cza | N | ADPADENOSINE-5'-DIPHOSPHATE | R - 426 |
1cza_N_423 | 1cza | N | ADPADENOSINE-5'-DIPHOSPHATE | K - 429 |
Bibliographic annotations |
Clusters included in this Subclass |
CLUSTER: HE.4.19 |