Information on SUBCLASS 4.15.5 |
Subclass Accession number: 1284
Subclass: 4.15.5 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 11.9 Average RMSD (Å) : 0.700 +/- 0.173 Consensus geometry
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Consensus Sequence: | hXXXXpXX |
(φψ)-conformation: | bbppabaa |
Pattern: | [AFL] | [EQ] | [FI] | [AEF] | [FPT] | [PT] | [KPR] | [DST] | x | [EGK] | [MV] | [AER] | [EQT] | [AET] | [IL] | [LMW] | [AN] | x |
Conservation: | -0.766 | 1.799 | 1.236 | -1.284 | -1.180 | 1.406 | -0.040 | -0.040 | -1.284 | -0.558 | 0.987 | -0.558 | -0.040 | -0.558 | 1.298 | 0.271 | 0.390 | -1.077 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5t_A_24 | 1b5t | A | 27 | 44 | FEFFPPRTSEMEQTLWNS | EEE---SSHHHHHHHHHH | bbbbxxabaaaaaaaaaa |
1hk8_A_97 | 1hk8 | A | 97 | 114 | AQIETPKSIGVATAIMAQ | EEE---SSHHHHHHHHHH | bxxbpxabaaaaaaaaaa |
1ua4_A_263 | 1ua4 | A | 265 | 282 | LEFAFTPDEKVREEILNV | EE------HHHHHHHHHH | bxxbpbaxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b5t_A_24 | 1b5t | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 28 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | Q - 98 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | I - 99 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | E - 100 |
1hk8_A_97 | 1hk8 | A | MNMANGANESE (II) ION | E - 100 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | T - 101 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | P - 102 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | K - 103 |
1hk8_A_97 | 1hk8 | A | MNMANGANESE (II) ION | K - 103 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | S - 104 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | G - 106 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | V - 107 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | A - 110 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | I - 111 |
1hk8_A_97 | 1hk8 | A | DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | Q - 114 |
1ua4_A_263 | 1ua4 | A | AMPADENOSINE MONOPHOSPHATE | E - 266 |
1ua4_A_263 | 1ua4 | A | GLCGLUCOSE | A - 268 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hk8_A_97 | 1hk8 | A | DG1DGT BINDING SITE FOR CHAIN A | E - 100 |
1hk8_A_97 | 1hk8 | A | DG1DGT BINDING SITE FOR CHAIN A | P - 102 |
1hk8_A_97 | 1hk8 | A | DG1DGT BINDING SITE FOR CHAIN A | K - 103 |
1hk8_A_97 | 1hk8 | A | DG1DGT BINDING SITE FOR CHAIN A | I - 111 |
Clusters included in this Subclass |
CLUSTER: EH.5.291 |