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Information on SUBCLASS 3.5.2
Subclass Accession number: 129
Subclass: 3.5.2
Type: HE alpha-beta
DB: ArchDB-KI
 Number of loops: 3

Average sequence ID (%) : 14.8 +/- 0.3
Average RMSD (Å) : 1.29 +/- 0.38

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXGXhXX
(φψ)-conformation: aalbpbb
Pattern: [EK][GL]xxxx[FLM]xxx[KL]x[G]x[AP]xxx
Conservation:1.159-0.163-0.714-0.861-0.273-0.7140.461-0.640-0.200-0.7140.215-0.6403.030-0.4941.0190.885-0.640-0.714
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e4y_A_131e4y   A1330KGTQAQFIMEKYGIPQISHHHHHHHHHHHTT--EEEaaaaaaaaaaaalbpxbx
1gc5_A_781gc5   A8097ELLGGILRSIKLGKAMEWHHHHHHHHHHHS---EEEaaaaaaaaaaaalbxbbb
1kbl_A_5951kbl   A599616KGDFKAMYKALEGRPMTVHHHHHHHHHHHTT--EEEaaaaaaaaaaalvxxbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e4y_A_131e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE K - 13
1e4y_A_131e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE G - 14
1e4y_A_131e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 15
1e4y_A_131e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE Q - 16
1e4y_A_131e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE S - 30
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4y_A_131e4y   A AC1AP5 BINDING SITE FOR CHAIN AK - 13
1e4y_A_131e4y   A AC1AP5 BINDING SITE FOR CHAIN AG - 14
1e4y_A_131e4y   A AC1AP5 BINDING SITE FOR CHAIN AT - 15
Bibliographic annotations
LoopPDBChainAnnotationResidue
1kbl_A_5951kbl   RefO.HERZBERG,C.C.CHEN,S.LIU,A.TEMPCZYK,A.HOWARD,M.WEI,D.YE,D.DUNAWAY-MARIANO. PYRUVATE SITE OF PYRUVATE PHOSPHATE DIKINASE: CRYSTAL STRUCTURE OF THE ENZYME-PHOSPHONOPYRUVATE COMPLEX, AND MUTANT ANALYSIS.  BIOCHEMISTRY v.41;780,2002AINHIBITOR BINDING RESIDUER - 617

Clusters included in this Subclass
CLUSTER: HE.5.15