Information on SUBCLASS 4.17.3 |
Subclass Accession number: 1290
Subclass: 4.17.3 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 6.7 +/- 9.0 Average RMSD (Å) : 1.167 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXhpXXXc |
(φψ)-conformation: | bbpppbaa |
Pattern: | [AFV] | [ITV] | [AKV] | x | x | [KMY] | [CPW] | [DQS] | x | [NV] | [ADK] | [DGN] | [DKN] | [LW] | [EMY] | [ENP] | x | x | [ENR] | [KR] |
Conservation: | -0.613 | 0.695 | -0.758 | -0.613 | -1.485 | -0.468 | -0.468 | 0.405 | -1.049 | 0.492 | -0.758 | 0.841 | 0.695 | 0.992 | -0.758 | -0.031 | -0.613 | -0.063 | 0.550 | 3.006 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e43_A_257 | 1e43 | A | 257 | 276 | FTVAEYWQNNAGKLENYLNK | EEEE----S-HHHHHHHHHH | pbbxxbxbxbaaaaaaaaaa |
1h7w_A_636 | 1h7w | A | 637 | 656 | VIASIMCSYNKNDWMELSRK | EEEEE---S-HHHHHHHHHH | bbxxbbbxxbaaaaaaaaaa |
1r89_A_277 | 1r89 | A | 280 | 299 | AVKFRKPDIVDDNLYPQLER | EEEEE--S--HHHHHHHHHH | bxbbxxxxbxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h7w_A_636 | 1h7w | A | FMNFLAVIN MONONUCLEOTIDE | S - 640 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 299 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | K - 303 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | E - 306 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | F - 307 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 310 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e43_A_257 | 1e43 | A | ACTACTIVE SITE RESIDUES. | E - 261 |
Clusters included in this Subclass |
CLUSTER: EH.6.87 |