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Information on SUBCLASS 4.17.3
Subclass Accession number: 1290
Subclass: 4.17.3 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 6.7 +/- 9.0
Average RMSD (Å) : 1.167 +/- 0.153

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXhpXXXc
(φψ)-conformation: bbpppbaa
Pattern: [AFV][ITV][AKV]xx[KMY][CPW][DQS]x[NV][ADK][DGN][DKN][LW][EMY][ENP]xx[ENR][KR]
Conservation:-0.6130.695-0.758-0.613-1.485-0.468-0.4680.405-1.0490.492-0.7580.8410.6950.992-0.758-0.031-0.613-0.0630.5503.006
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e43_A_2571e43   A257276FTVAEYWQNNAGKLENYLNKEEEE----S-HHHHHHHHHHpbbxxbxbxbaaaaaaaaaa
1h7w_A_6361h7w   A637656VIASIMCSYNKNDWMELSRKEEEEE---S-HHHHHHHHHHbbxxbbbxxbaaaaaaaaaa
1r89_A_2771r89   A280299AVKFRKPDIVDDNLYPQLEREEEEE--S--HHHHHHHHHHbxbbxxxxbxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h7w_A_6361h7w   A     FMNFLAVIN MONONUCLEOTIDE S - 640
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE R - 299
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE K - 303
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE E - 306
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE F - 307
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE R - 310
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e43_A_2571e43   A ACTACTIVE SITE RESIDUES.E - 261

Clusters included in this Subclass
CLUSTER: EH.6.87