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Information on SUBCLASS 4.25.1
Subclass Accession number: 1310
Subclass: 4.25.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.18 (>75 %)  
GO : GO:0004364 (>75 %)  GO:0016614 (>50 %)  GO:0016616 (>50 %)  GO:0016765 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51751 (>75 %)  52832 (>75 %)  52833 (>75 %)  52862 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 12.3 +/- 15.5
Average RMSD (Å) : 0.940 +/- 0.313

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hphXDpXX
(φψ)-conformation: bbpbapaa
Pattern: x[dty]xx[ADKS][GIMWY][DGSV][DY][DERS][KPRT][AKQS][dqr][filv]
Conservation:-1.073-0.912-0.3580.2100.133-0.975-0.5442.7750.7150.2280.380-0.328-0.253
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hh2_P_2691hh2   P270282LDVLKWSDDPKQLEEEEE--SSHHHHbxxbxxbaxaaaa
1i52_A_761i52   A7688ITVVDGGDERADSEEEEE--SSHHHHbbbbxxbabaaaa
1k0r_A_2541k0r   A255267IDIIDYDDDPARFEEEEE--SSHHHHbxxbxxbaxaaaa
1ltq_A_2711ltq   A271283DVKLAIDDRTQVVEEEEEEE--HHHHxxabbbbaxaaaa
1pfo_*_1781pfo   -180192QYSESMVYSKSQIEEEEEE---HHHHbbbbbxbabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i52_A_761i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE G - 81
1i52_A_761i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE G - 82
1i52_A_761i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE D - 83
1i52_A_761i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE E - 84
1i52_A_761i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE R - 85
1i52_A_761i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE S - 88
1i52_A_761i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE V - 89
1ltq_A_2711ltq   A     MSESELENOMETHIONINE T - 280
1ltq_A_2711ltq   A     MSESELENOMETHIONINE Q - 281
1ltq_A_2711ltq   A     MSESELENOMETHIONINE V - 282
1ltq_A_2711ltq   A     MSESELENOMETHIONINE V - 283

Clusters included in this Subclass
CLUSTER: EH.3.114