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Information on SUBCLASS 2.3.2
Subclass Accession number: 134
Subclass: 2.3.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 17.2 +/- 17.4
Average RMSD (Å) : 0.623 +/- 0.205

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXhpXh
(φψ)-conformation: aapabb
Pattern: x[afilpvy]x[aeknqr][AFLV][ilmt][agps]x[AFIV][DEKQRTY]x[cflvy]x
Conservation:-0.888-0.684-0.591-0.1330.8641.2512.088-1.1040.8890.432-0.772-0.682-0.670
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8i_*_6501a8i   -652664LAEKVIPAADLSEHHHHHGGG-SEEEaaaaaaaaxabbx
1a99_A_2091a99   A213224LLLKLRPNIRYF.HHHHHGGG--EE.aaaaaaaaxabb.
1bx4_A_2071bx4   A209221SLMKVMPYVDILFHHHHHGGG-SEEEaaaaaaaaxabbb
1df7_A_971df7   A99111VYALALPYATRCEHHHHHGGG-SEEEaaaaaaaaxabbb
1juv_A_1301juv   A132144LLYAALPYADEVVHHHHHGGG-SEEEaaaaaaaaxabbb
1m1n_A_2591m1n   A260272SEIELTPKVKLNLHHHHHGGG-SEEEaaaaaaaaxabbb
1mkz_A_871mkz   A8798APEALLPLFDRE.HHHHHGGG-SEE.aaaaaaaaxabx.
1ogc_A_981ogc   A100112EFKLLTKDAKAVIHHHHHGGG-S-EEaaaaaaaaxabbb
1pq4_A_891pq4   A90102QQLAALSEAEAYVHHHHHGGG-SEEEaaaaaaaaxabbb
1ra9_*_971ra9   -99111VYEQFLPKAQKLYHHHHHGGG-SEEEaaaaaaaaxabbb
1ua4_A_2731ua4   A278290EILNVLGMFYSVGHHHHHGGG-SEEEaaaaaaaaxabbb
1ukk_A_1241ukk   A124136PVSRALAGVKEVVHHHHHTTT-SEEEaaaaaaaaxabbb
1v1a_A_1731v1a   A179191FLERALPGVDLLFHHHHHGGG-SEEEaaaaaaaaxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a8i_*_6501a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) V - 650
1a8i_*_6501a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) A - 653
1a8i_*_6501a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) I - 657
1a8i_*_6501a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) Q - 665
1bx4_A_2071bx4   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED F - 221
1bx4_A_2071bx4   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED G - 222
1bx4_A_2071bx4   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED N - 223
1bx4_A_2071bx4   A     ADNADENOSINE N - 223
1df7_A_971df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 97
1df7_A_971df7   A     GOLGLYCEROL G - 97
1df7_A_971df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 98
1df7_A_971df7   A     GOLGLYCEROL Q - 98
1df7_A_971df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 99
1df7_A_971df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 100
1df7_A_971df7   A     MTXMETHOTREXATE Y - 100
1df7_A_971df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 102
1df7_A_971df7   A     MTXMETHOTREXATE E - 111
1df7_A_971df7   A     MTXMETHOTREXATE V - 112
1df7_A_971df7   A     GOLGLYCEROL V - 112
1df7_A_971df7   A     MTXMETHOTREXATE T - 113
1df7_A_971df7   A     GOLGLYCEROL T - 113
1df7_A_971df7   A     GOLGLYCEROL E - 114
1df7_A_971df7   A     GOLGLYCEROL V - 115
1juv_A_1301juv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 130
1juv_A_1301juv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 131
1juv_A_1301juv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 132
1juv_A_1301juv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 133
1ra9_*_971ra9   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 97
1ra9_*_971ra9   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 98
1ra9_*_971ra9   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 99
1ra9_*_971ra9   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 100
1ra9_*_971ra9   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 102
1ua4_A_2731ua4   A     AMPADENOSINE MONOPHOSPHATE L - 291
1ukk_A_1241ukk   A     CSD3-SULFINOALANINE P - 124
1ukk_A_1241ukk   A     CSD3-SULFINOALANINE V - 125
1ukk_A_1241ukk   A     CSD3-SULFINOALANINE S - 126
1ukk_A_1241ukk   A     CSD3-SULFINOALANINE R - 127
1v1a_A_1731v1a   A     ADPADENOSINE-5'-DIPHOSPHATE S - 193

Clusters included in this Subclass
CLUSTER: HE.5.15