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Information on SUBCLASS 4.48.1
Subclass Accession number: 1345
Subclass: 4.48.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 25.5 +/- 16.8
Average RMSD (Å) : 0.433 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXGGhphX
(φψ)-conformation: pbelpbaa
Pattern: [ILP][V][AGL]x[G][G][IL][HNT][IPV][DEW][HN][AMV]x[APS][ALV][IV][DEQ]
Conservation:-0.9470.903-1.138-0.6792.0522.0520.376-0.309-0.692-0.6280.874-0.564-0.883-0.564-0.6280.6370.138
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gk8_A_3751gk8   A376392PVASGGIHVWHMPALVEEEEESS--GGGHHHHHHwbxbevbbaaaaaaaaa
1nsj_*_1541nsj   -154170LVLSGGLNPENVRSAIDEEEESS--TTTHHHHHHbbxbMvxbaaaaaaaaa
2tps_A_1832tps   A183199IVGIGGITIDNAAPVIQEEEESS--TTTSHHHHHbbxbevxbaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gk8_A_3751gk8   A     CAP2-CARBOXYARABINITOL-1,5-DIPHOSPHATE V - 377
1gk8_A_3751gk8   A     CAP2-CARBOXYARABINITOL-1,5-DIPHOSPHATE A - 378
1gk8_A_3751gk8   A     KCXLYSINE NZ-CARBOXYLIC ACID S - 379
1gk8_A_3751gk8   A     CAP2-CARBOXYARABINITOL-1,5-DIPHOSPHATE S - 379
1gk8_A_3751gk8   A     CAP2-CARBOXYARABINITOL-1,5-DIPHOSPHATE G - 380
1gk8_A_3751gk8   A     CAP2-CARBOXYARABINITOL-1,5-DIPHOSPHATE G - 381
1gk8_A_3751gk8   A     CAP2-CARBOXYARABINITOL-1,5-DIPHOSPHATE I - 382
1nsj_*_1541nsj   *     PO4PHOSPHATE ION S - 157
1nsj_*_1541nsj   *     PO4PHOSPHATE ION G - 158
1nsj_*_1541nsj   *     PO4PHOSPHATE ION G - 159
1nsj_*_1541nsj   *     PO4PHOSPHATE ION L - 160
2tps_A_1832tps   A     TPSTHIAMIN PHOSPHATE V - 184
2tps_A_1832tps   A     TPSTHIAMIN PHOSPHATE I - 186
2tps_A_1832tps   A     TPSTHIAMIN PHOSPHATE G - 187
2tps_A_1832tps   A     TPSTHIAMIN PHOSPHATE G - 188
2tps_A_1832tps   A     TPSTHIAMIN PHOSPHATE I - 189

Clusters included in this Subclass
CLUSTER: EH.7.84