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Information on SUBCLASS 4.51.1
Subclass Accession number: 1348
Subclass: 4.51.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>75 %)  3.4 (>75 %)  3.4.19 (>75 %)  3.4.19.3 (>75 %)  3.4.25 (>50 %)  3.4.25.1
GO : GO:0004219 (>75 %)  GO:0008233 (>75 %)  GO:0008234 (>75 %)  GO:0008238 (>75 %)  GO:0008242 (>75 %)  GO:0016757 (>50 %)  GO:0016763 (>50 %)  GO:0050144 (>50 %)  
SCOP : 52171 (>50 %)  52309 (>50 %)  52310 (>50 %)  53162 (>75 %)  53182 (>75 %)  53183 (>75 %)  56234 (>50 %)  56235 (>50 %)  56251 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 17.6 +/- 16.9
Average RMSD (Å) : 0.600 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXhXpDX
(φψ)-conformation: bbpaabaa
Pattern: [IT][PY][FIL][GS]x[DGP][FVW]x[DST][D][AR][AQ]x[DEK][AR]x[AKV]
Conservation:-0.0680.3750.0820.850-0.816-0.547-0.188-0.188-0.1883.313-0.0250.150-1.0850.261-0.025-0.995-0.906
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f8y_A_61f8y   A622IYFGAGWFTDRQNKAYKEEEE---SSHHHHHHHHbbxxbxaabaaaaaaaa
1ff9_A_491ff9   A5066TPISLDVNDDAALDAEVEEEE--TT-HHHHHHHHbwbbbxaaxaaaaaaaa
1s2d_A_81s2d   A1026IYLGSPFYSDAQRERAAEEEE---SSHHHHHHHHxbxxbwaabaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f8y_A_61f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE Y - 7
1f8y_A_61f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE F - 8
1f8y_A_61f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE G - 9
1f8y_A_61f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE A - 10
1f8y_A_61f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE G - 11
1f8y_A_61f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE W - 12
1f8y_A_61f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE F - 13
1s2d_A_81s2d   A     AR42-AMINO-5-(3-FLUORO-3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-5-HYDROXY-PENTANOIC ACID Y - 11
1s2d_A_81s2d   A     AR42-AMINO-5-(3-FLUORO-3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-5-HYDROXY-PENTANOIC ACID L - 12
1s2d_A_81s2d   A     AR42-AMINO-5-(3-FLUORO-3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-5-HYDROXY-PENTANOIC ACID G - 13
1s2d_A_81s2d   A     AR42-AMINO-5-(3-FLUORO-3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-5-HYDROXY-PENTANOIC ACID S - 14
1s2d_A_81s2d   A     AR42-AMINO-5-(3-FLUORO-3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-5-HYDROXY-PENTANOIC ACID P - 15
1s2d_A_81s2d   A     AR42-AMINO-5-(3-FLUORO-3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-5-HYDROXY-PENTANOIC ACID F - 16
1s2d_A_81s2d   A     AR42-AMINO-5-(3-FLUORO-3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-5-HYDROXY-PENTANOIC ACID Y - 17
1s2d_A_81s2d   A     ADEADENINE Y - 17

Clusters included in this Subclass
CLUSTER: EH.5.224