ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.4.1

Subclass Accession number: 135
Subclass: 5.4.1
Type: HE alpha-beta
DB: ArchDB-KI

Number of loops: 3

Average sequence ID (%) : 52.0 +/- 1.3
Average RMSD (Å) : 0.42 +/- 0.07

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	XpNPppPhX
(φψ)-conformation:	aabppbwbb

Pattern:	[F]	[L]	[LM]	[E]	[K]	[E]	[IL]	[EK]	[FVY]	[FL]	x	[K]	[AV]	[LT]	[ESY]	[N]	[P]	[DET]	[KR]	[P]	[FY]	[LTV]	[AV]	[IV]	[IL]
Conservation:	1.343	0.195	-0.134	0.769	0.769	0.769	-0.367	-0.320	-0.889	-0.722	-0.555	0.769	-0.929	-1.105	-1.590	1.343	1.917	-1.080	-0.074	1.917	0.605	-1.271	-0.929	-0.086	-0.349

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1php_*_169	1php	-	169	193	FLMEKELEVLGKALSNPDRPFTAII	HHHHHHHHHHHHHHHS--SSEEEEE	aaaaaaaaaaaaaaabxxb-bbbbb
1qpg_*_185	1qpg	-	185	209	FLLEKELKYFGKALENPTRPFLAIL	HHHHHHHHHHHHHHSS--SSEEEEE	aaaaaaaaaaaaaaabxxx-xbbxb
1vpe_*_169	1vpe	-	169	193	FLMEKEIKFLSKVTYNPEKPYVVVL	HHHHHHHHHHHHHHH---SSEEEEE	aaaaaaaaaaaaaaabxxb-bbbbb

Clusters included in this Subclass