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Information on SUBCLASS 5.1.1
Subclass Accession number: 1359
Subclass: 5.1.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 64

Average sequence ID (%) : 10.7 +/- 13.3
Average RMSD (Å) : 0.814 +/- 0.276

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XhXXXXpXX
(φψ)-conformation: bbpaappaa
Pattern: [acfgilvy]x[acfgilvwy]xx[adegknqrst]x[dehknpqrst]xx[adegknqrst][afgiklmtv]
Conservation:-0.066-1.4130.430-0.790-0.5120.377-0.3732.067-1.274-0.1341.2360.453
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1acf_*_941acf   -98109GVYNEKIQPGTAEEE-TTS-HHHHbxbbaabxaaaa
1bup_A_1411bup   A144155VTVPAYFNDSQREEE-TT--HHHHbbbxaapxaaaa
1cr1_A_3371cr1   A338349GLAMLEESVEETEEEESSS-HHHHxbbbaaxxaaaa
1d0n_A_1961d0n   A199210QWCGSKSNRFEREEE-TT--HHHHxbbpaaxxaaaa
1d0n_A_5781d0n   A578588.WVGAGASEAEK.EE-TT--HHHH.pbxaaxbaaaa
1eg7_A_13771eg7   A13811392INAFPTDTEAELEE--TT--HHHHxxpbaapbaaaa
1ei6_A_2921ei6   A295306VYLRDAVPQRDAEEE-TTS-HHHHbbbxaaxxaaaa
1f0x_A_1151f0x   A116127VLAYPGTTLYSLEEE-TT-BHHHHbbbbaaxxaaaa
1f14_A_1681f14   A171182VIKTPMTSQKTFEEE-SS--HHHHxbbxaapxaaaa
1f60_B_11201f60   B11281139KPWDDETNLEEMEESSTTS-HHHHbxabaapxaaaa
1fmt_A_1501fmt   A156167CPITAEDTSGTLEE--TT--HHHHbxxxaaxbaaaa
1g61_A_20251g61   A20262037TLLPIFLDKDDVEEE-TT--HHHHbbbxaaxxaaaa
1g61_A_21601g61   A21612172CLTHPLVEDDELEEE-TT--HHHHbbbpaaxxaaaa
1g61_A_22071g61   A22072218AVVGGDTTGPELEEEETT--HHHHbbbpaapxaaaa
1g62_A_1141g62   A115126ALVHPDIDRETEEEE-TT--HHHHbbbpaaxxaaaa
1g62_A_1591g62   A159170GLVHPQTSVQDQEEE-TT--HHHHbbbpaapxaaaa
1g62_A_2041g62   A204215AVTGLDTTAPELEEEETT--HHHHbbbxaapxaaaa
1gnu_A_481gnu   A4960YLVPSDLTVGQFEEEETT-BHHHHbbbxaaxxaaaa
1gsi_A_1901gsi   A192203LVVGADVDPGRLEEE-TT--HHHHbbbbaaxxaaaa
1gtm_A_711gtm   A7182IRWHPEETLSTVEEE-TT--HHHHbxbbaapbaaaa
1h4r_A_321h4r   A3546FNCEMKWKGKDLEEEETT-BHHHHbxxpaaxxaaaa
1hn0_A_8711hn0   A875886YMVFLDATPEKMEEEETT--HHHHbbbbaaxbaaaa
1hrd_A_881hrd   A92103LRFAPSVNLSIMEEE-TT--HHHHbbbbaapbaaaa
1hsk_A_1101hsk   A111122IIAGSGAAIIDVEEEETTSBHHHHbbbxaaxxaaaa
1hwx_A_891hwx   A93104IRYSTDVSVDEVEEE-TT--HHHHbxbbaaxbaaaa
1i19_A_1591i19   A160171VTAGAGASIEAIEEEETTSBHHHHbbbxaaxxaaaa
1i2a_A_1591i2a   A163174LVGNEKMTDEQIEEEETTS-HHHHxaebaaxxaaaa
1ifq_A_691ifq   A7384VLCEAAFPKKLAEE--TTS-HHHHbbbpaaxpaaaa
1j3w_A_1031j3w   A107118LVFDETAPLGKVEEE-TTS-HHHHbbbbaabxaaaa
1j93_A_2691j93   A270281VSLDWTVDMADGEE--TTS-HHHHbxxxaabxaaaa
1jce_A_971jce   A100111IGVPIGITDVEREEE-TT--HHHHbxbxaaxxaaaa
1jkx_A_1481jkx   A154165VPVFAGDSEDDIEE--TT--HHHHbxbbaapxaaaa
1k0g_A_4181k0g   A425436GGIVADSQEEAEEEE-TT--HHHHbxxbaaxbaaaa
1k1x_A_4871k1x   A491502HFIKPEETLDNYEEE-TT--HHHHbbbxaaxbaaaa
1kcq_A_1961kcq   A199210QWCGSNSNRYEREEE-TT--HHHHxbbxaaxbaaaa
1lfd_A_321lfd   A3445ILVTSQDKAPTVEEEETT-BHHHHbbbxaaxxaaaa
1lou_A_21lou   A819IVLNPNLDQSQLEEE-TT--HHHHbbbpaaxxaaaa
1m1n_A_3731m1n   A376387GTGYEFAHNDDYEEEESS--HHHHbbbbaNxbaaaa
1m1n_B_3891m1n   B392403HILCHNGNKRWKEEEETT--HHHHbbbbaaxbaaaa
1mk4_A_671mk4   A7384SGVHPDFRKMQIEEE-TTS-HHHHbbbpaabxaaaa
1n62_C_691n62   C7081VVIGAMTTQHALEEEETT-BHHHHbbbxaaxxaaaa
1nbw_A_1331nbw   A135146VLIDDAVDFLDAEEE-SSS-HHHHxxbxaabpaaaa
1nij_A_651nij   A6576ICCSRSNELEDAEEE-TTS-HHHHbbbxaaxxaaaa
1nlf_A_711nlf   A7283IYLPAEDPPTAIEEEESSS-HHHHbbbwaabxaaaa
1o50_A_151o50   A1526TVVEEDTPIEEIEEE-TT-BHHHHxbbxaaxxaaaa
1o7e_B_2591o7e   B264275YLQAGAISYEQREEE-TTS-HHHHbbbbaabxaaaa
1ofu_A_2601ofu   A265276ITAGPDLSLGEYEEE-TT--HHHHbbbxaaxxaaaa
1ogw_A_121ogw   A1526LEVEPSDTIENVEE--TTSBHHHHbbbbaaxxaaaa
1p0k_A_1191p0k   A121132ANLGSEATAAQAEEEETT--HHHHxbbxaapxaaaa
1p8x_A_5751p8x   A577588LWVGTGASEAEKEEE-TT--HHHHbxbxaaxxaaaa
1p8x_A_6801p8x   A682693VWVGKDSQEEEKEEE-TT--HHHHbxbxaaxxaaaa
1pv9_A_871pv9   A8899LGIEGTLSYSMVEEE-TTS-HHHHbxbxaapxaaaa
1pvm_A_811pvm   A8191.KVKSDYDVKDV.EEETT-BHHHH.bbxaaxxaaaa
1qdl_A_3041qdl   A313324GTLKKKYNALNVEEB-TT--HHHHbbxxaabbaaaa
1qdl_A_3851qdl   A392403AGIVYDSNPESEEEE-TT--HHHHbxxbaaxxaaaa
1qlt_A_1391qlt   A140151CVVEPGVTYHDLEEE-TT-BHHHHbbbxaaxxaaaa
1qmh_A_2471qmh   A252263VVGEKRVSAEVVEE--TT--HHHHbxxxaabxaaaa
1qo0_A_2291qo0   A229239.IASLTTSEAEV.EEESS--HHHH.bbbaapbaaaa
1r3s_A_2791r3s   A280291VGLDWTVAPKKAEE--TTS-HHHHbxbxaaxxaaaa
1r89_A_591r89   A6475LLFPEEFSKEELEEE-TTS-HHHHxbbpaaxxaaaa
1svy_*_1971svy   -200211QFNGSKSSPQEKEEE-TT--HHHHbbxpaaxxaaaa
1uxy_*_781uxy   -8192LHVGAGENWHRLEEEETTSBHHHHbbbpaaxxaaaa
1vgy_A_2511vgy   A258269FRFSTESTEAGLEEE-TTS-HHHHbbbxaabbaaaa
1xyz_A_7491xyz   A757768IRIPQSENPATAEEEETTS-HHHHbxbpaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bup_A_1411bup   A     PIHYDROGENPHOSPHATE ION V - 146
1bup_A_1411bup   A     PIHYDROGENPHOSPHATE ION P - 147
1bup_A_1411bup   A     PIHYDROGENPHOSPHATE ION Y - 149
1f0x_A_1151f0x   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 120
1gnu_A_481gnu   A     NINICKEL (II) ION K - 66
1gnu_A_481gnu   A     NINICKEL (II) ION R - 67
1hsk_A_1101hsk   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 115
1hwx_A_891hwx   A     GLUGLUTAMIC ACID K - 90
1hwx_A_891hwx   A     GLUGLUTAMIC ACID G - 91
1hwx_A_891hwx   A     GLUGLUTAMIC ACID G - 92
1hwx_A_891hwx   A     GLUGLUTAMIC ACID I - 93
1hwx_A_891hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE R - 94
1hwx_A_891hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 107
1hwx_A_891hwx   A     GLUGLUTAMIC ACID M - 111
1hwx_A_891hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE T - 112
1hwx_A_891hwx   A     GLUGLUTAMIC ACID K - 114
1hwx_A_891hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE K - 114
1hwx_A_891hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE C - 115
1hwx_A_891hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE A - 116
1i19_A_1591i19   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 164
1i19_A_1591i19   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 165
1ifq_A_691ifq   A     MSESELENOMETHIONINE C - 70
1ifq_A_691ifq   A     MSESELENOMETHIONINE Y - 71
1ifq_A_691ifq   A     MSESELENOMETHIONINE L - 72
1ifq_A_691ifq   A     MSESELENOMETHIONINE V - 73
1ifq_A_691ifq   A     MSESELENOMETHIONINE L - 74
1ifq_A_691ifq   A     MSESELENOMETHIONINE C - 75
1ifq_A_691ifq   A     MSESELENOMETHIONINE E - 76
1ifq_A_691ifq   A     MSESELENOMETHIONINE A - 77
1ifq_A_691ifq   A     GOLGLYCEROL Q - 98
1ifq_A_691ifq   A     GOLGLYCEROL H - 99
1j3w_A_1031j3w   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID L - 120
1j3w_A_1031j3w   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID H - 121
1j3w_A_1031j3w   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID R - 124
1jce_A_971jce   A     MSESELENOMETHIONINE I - 114
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE T - 166
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE V - 169
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE Q - 170
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE E - 173
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE H - 174
1kcq_A_1961kcq   A     CDCADMIUM ION H - 198
1kcq_A_1961kcq   A     CDCADMIUM ION N - 204
1kcq_A_1961kcq   A     CDCADMIUM ION S - 205
1kcq_A_1961kcq   A     CDCADMIUM ION N - 206
1kcq_A_1961kcq   A     CDCADMIUM ION E - 209
1m1n_A_3731m1n   A     CACALCIUM ION E - 380
1m1n_A_3731m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID E - 380
1m1n_A_3731m1n   A     CFNFE(7)-MO-S(9)-N CLUSTER E - 380
1m1n_A_3731m1n   A     CACALCIUM ION F - 381
1m1n_A_3731m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID F - 381
1m1n_A_3731m1n   A     CFNFE(7)-MO-S(9)-N CLUSTER F - 381
1n62_C_691n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE A - 74
1n62_C_691n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE M - 75
1n62_C_691n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 78
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE L - 15
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE I - 23
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE V - 26
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE K - 27
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE I - 30
1p8x_A_5751p8x   A     CACALCIUM ION G - 582
1p8x_A_5751p8x   A     CACALCIUM ION A - 583
1p8x_A_5751p8x   A     CACALCIUM ION S - 584
1p8x_A_5751p8x   A     CACALCIUM ION E - 587
1p8x_A_6801p8x   A     CACALCIUM ION D - 687
1p8x_A_6801p8x   A     CACALCIUM ION S - 688
1p8x_A_6801p8x   A     CACALCIUM ION Q - 689
1p8x_A_6801p8x   A     CACALCIUM ION E - 692
1qlt_A_1391qlt   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 144
1qlt_A_1391qlt   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 148
1qo0_A_2291qo0   A     BMDBUTYRAMIDE L - 232
1qo0_A_2291qo0   A     BMDBUTYRAMIDE T - 233
1r89_A_591r89   A     MNMANGANESE (II) ION E - 59
1r89_A_591r89   A     MGMAGNESIUM ION E - 59
1r89_A_591r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE E - 59
1r89_A_591r89   A     MNMANGANESE (II) ION I - 60
1r89_A_591r89   A     MGMAGNESIUM ION I - 60
1r89_A_591r89   A     MNMANGANESE (II) ION D - 61
1r89_A_591r89   A     MGMAGNESIUM ION D - 61
1r89_A_591r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE D - 61
1r89_A_591r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE F - 63
1svy_*_1971svy   *     CSOS-HYDROXYCYSTEINE Q - 200
1svy_*_1971svy   *     CSOS-HYDROXYCYSTEINE F - 201
1svy_*_1971svy   *     CACALCIUM ION F - 201
1svy_*_1971svy   *     CSOS-HYDROXYCYSTEINE N - 202
1svy_*_1971svy   *     CACALCIUM ION N - 202
1svy_*_1971svy   *     CSOS-HYDROXYCYSTEINE G - 203
1svy_*_1971svy   *     CACALCIUM ION G - 203
1svy_*_1971svy   *     CSOS-HYDROXYCYSTEINE S - 204
1svy_*_1971svy   *     CSOS-HYDROXYCYSTEINE S - 206
1svy_*_1971svy   *     CSOS-HYDROXYCYSTEINE K - 211
1svy_*_1971svy   *     CACALCIUM ION D - 222
1uxy_*_781uxy   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 85
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qo0_A_2291qo0   A LGABUTYRAMIDE BINDING SITET - 233

Clusters included in this Subclass
CLUSTER: EH.3.55
CLUSTER: EH.4.7
CLUSTER: EH.4.70
CLUSTER: EH.4.87
CLUSTER: EH.5.1
CLUSTER: EH.5.142
CLUSTER: EH.5.244
CLUSTER: EH.5.31
CLUSTER: EH.5.85
CLUSTER: EH.6.1
CLUSTER: EH.6.186
CLUSTER: EH.6.190
CLUSTER: EH.6.38
CLUSTER: EH.6.91
CLUSTER: EH.7.70