Information on SUBCLASS 5.1.6 |
Subclass Accession number: 1364
Subclass: 5.1.6 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003779 (>75 %) GO:0003779 (>75 %) GO:0004672 (>75 %) GO:0005515 (>75 %) GO:0005515 (>75 %) GO:0008092 (>75 %) GO:0008092 (>75 %) GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016773 (>75 %) SCOP : 55752 (>75 %) 55752 (>75 %) 55753 (>75 %) 55753 (>75 %) 55754 (>75 %) 55762 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 21.4 +/- 22.1 Average RMSD (Å) : 0.640 +/- 0.321 Consensus geometry
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Consensus Sequence: | hXcXXXXXp |
(φψ)-conformation: | bbpaappaa |
Pattern: | [HILV] | [afy] | [pvy] | [VW] | [gklv] | [GK] | [AKN] | [CDEQ] | x | [NPQST] | [dpq] | [DE] | [EK] | x |
Conservation: | -0.260 | -0.065 | -1.017 | 2.209 | -1.172 | 0.814 | -0.346 | -0.351 | -0.488 | -0.464 | -0.462 | 1.344 | 1.185 | -0.928 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ad2_*_170 | 1ad2 | - | 172 | 185 | HAPVGKACFPPEKL | EEEEEETTS-HHHH | bbxaebaapxaaaa |
1d0n_A_314 | 1d0n | A | 315 | 328 | IFVWKGKQANMEER | EEEEE-TTS-HHHH | bbbbbxaaxpaaaa |
1d0n_A_458 | 1d0n | A | 463 | 476 | IYNWQGAQSTQDEV | EEEEE-TTS-HHHH | bbbxbxaaxxaaaa |
1d0n_A_680 | 1d0n | A | 680 | 693 | VFVWVGKDSQDEEK | EEEEE-TTS-HHHH | bxbxbxaaxxaaaa |
1d4x_G_57 | 1d4x | G | 61 | 74 | LHYWLGNECSQDES | EEEEE-TT--HHHH | bbbxbxaaxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ad2_*_170 | 1ad2 | * | HGMERCURY (II) ION | H - 172 |
1ad2_*_170 | 1ad2 | * | MPD2-METHYL-2,4-PENTANEDIOL | P - 174 |
1ad2_*_170 | 1ad2 | * | MPD2-METHYL-2,4-PENTANEDIOL | V - 175 |
1ad2_*_170 | 1ad2 | * | MPD2-METHYL-2,4-PENTANEDIOL | G - 176 |
1ad2_*_170 | 1ad2 | * | MPD2-METHYL-2,4-PENTANEDIOL | K - 177 |
1ad2_*_170 | 1ad2 | * | MPD2-METHYL-2,4-PENTANEDIOL | F - 180 |
1ad2_*_170 | 1ad2 | * | MPD2-METHYL-2,4-PENTANEDIOL | N - 188 |
1d4x_G_57 | 1d4x | G | CACALCIUM ION | E - 68 |
1d4x_G_57 | 1d4x | G | CACALCIUM ION | C - 69 |
1d4x_G_57 | 1d4x | G | CACALCIUM ION | S - 70 |
1d4x_G_57 | 1d4x | G | CACALCIUM ION | E - 73 |
Clusters included in this Subclass |
CLUSTER: EH.4.245 |
CLUSTER: EH.6.80 |